Factsheet for HORVU4Hr1G079860.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15578	Soybean	cytosol	15.56	61.84
Bra003135.1-P	Field mustard	cytosol	25.5	46.11
Bra039788.1-P	Field mustard	cytosol	25.5	46.11
Bra007000.1-P	Field mustard	cytosol	25.5	45.83
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	28.81	41.04
GSMUA_Achr1P09040_001	Banana	cytosol	29.14	40.37
Solyc06g075090.2.1	Tomato	cytosol	25.5	40.31
GSMUA_Achr6P36490_001	Banana	cytosol	28.48	39.63
KRH29895	Soybean	cytosol	28.81	39.55
Bra017202.1-P	Field mustard	cytosol	27.48	39.52
CDY44352	Canola	cytosol	26.49	39.41
Bra023107.1-P	Field mustard	cytosol	26.82	39.32
KRH22873	Soybean	cytosol	27.15	39.23
Bra034399.1-P	Field mustard	cytosol	27.48	38.97
CDY62895	Canola	cytosol	25.5	38.89
KRH26448	Soybean	cytosol	26.82	38.76
PGSC0003DMT400027157	Potato	cytosol	28.15	38.64
AT5G03270.1	Thale cress	cytosol	25.5	38.31
Solyc10g084150.1.1	Tomato	cytosol	27.81	38.18
Solyc09g007830.2.1	Tomato	cytosol	27.48	38.07
PGSC0003DMT400055525	Potato	cytosol	27.48	38.07
Bra011962.1-P	Field mustard	cytosol	26.82	38.03
KRH67693	Soybean	cytosol	27.48	37.9
KRG95991	Soybean	cytosol	27.48	37.9
KRH19875	Soybean	cytosol	27.48	37.9
KRH15614	Soybean	cytosol, extracellular, plastid	8.61	37.68
VIT_08s0040g01780.t01	Wine grape	cytosol	27.15	37.61
PGSC0003DMT400020890	Potato	cytosol	28.15	37.28
KRH25030	Soybean	cytosol	28.48	36.91
KRH32483	Soybean	cytosol, golgi, mitochondrion	21.85	36.46
Solyc11g069570.1.1	Tomato	cytosol	27.81	35.9
HORVU5Hr1G124750.1	Barley	cytosol	27.81	33.87
HORVU2Hr1G089620.5	Barley	cytosol	28.48	32.7
HORVU4Hr1G005660.7	Barley	nucleus	23.51	32.13
HORVU1Hr1G094290.7	Barley	plastid	26.16	27.53
HORVU1Hr1G079570.13	Barley	plastid	25.17	26.76
KRH07771	Soybean	cytosol	5.96	24.66
HORVU3Hr1G066810.9	Barley	mitochondrion	21.52	23.3
HORVU3Hr1G050770.10	Barley	mitochondrion	25.83	22.35

Protein Annotations

EnsemblPlants:HORVU4Hr1G079860.4	EnsemblPlantsGene:HORVU4Hr1G079860	Gene3D:3.40.50.450	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF40
PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	UniParc:UPI000B478217	UniProt:A0A287PUD0	MapMan:11.4.1.2

Description

No Description!

Coordinates

chrchr4H:-:613523346..613527954

Molecular Weight (calculated)

33943.0 Da

IEP (calculated)

11.999

GRAVY (calculated)

-0.817

Length

302 amino acids

Sequence
(BLAST)

001: TSRCALTHPS IRTAQHTPEQ RERKREGKRE RDQDEAAGEQ VQEAVRLLRQ QPGQQEQLPR RRHRPRQPAR GRGHRPGVRR RQHRADGARL AGRLPRRQAC
101: HRVSCSCTKL LASSMVRSSL YIISSHLGAL YWMRVQGDSQ DSHDPREIVG EMVGEVRPVG DMHQRKAEMA RLSDAFIALP GGYGTLEELL EVITWAQLGI
201: HHKPGRPAEC GGVLRLAAHL HRPGRGGGLH QPRRPPHHRL RPHRPPAHGE TRGVRSLLRH GRVRAGLGGG SPRLLIVEEK FAISVSVWHA DRAKGVMKIS
301: VQ

Best Arabidopsis Sequence Match ( AT2G28305.3 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEVAFSLFS LLV

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.