Factsheet for Bra017202.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023107.1-P	Field mustard	cytosol	93.81	95.63
CDX91344	Canola	mitochondrion	90.48	95.48
Bra003135.1-P	Field mustard	cytosol	71.43	89.82
Bra039788.1-P	Field mustard	cytosol	70.0	88.02
Bra007000.1-P	Field mustard	cytosol	70.0	87.5
CDX74979	Canola	cytosol	92.86	85.15
Solyc09g007830.2.1	Tomato	cytosol	87.62	84.4
PGSC0003DMT400055525	Potato	cytosol	87.62	84.4
AT2G37210.2	Thale cress	cytosol	95.71	84.1
VIT_08s0040g01780.t01	Wine grape	cytosol	87.14	83.94
Solyc10g084150.1.1	Tomato	cytosol	87.14	83.18
KRG95991	Soybean	cytosol	86.67	83.11
PGSC0003DMT400027157	Potato	cytosol	86.67	82.73
KRH19875	Soybean	cytosol	86.19	82.65
KRH67693	Soybean	cytosol	85.71	82.19
GSMUA_Achr6P36490_001	Banana	cytosol	83.81	81.11
Bra034399.1-P	Field mustard	cytosol	81.9	80.75
Zm00001d014016_P001	Maize	mitochondrion, nucleus	79.05	80.19
GSMUA_Achr1P09040_001	Banana	cytosol	82.86	79.82
Bra011962.1-P	Field mustard	cytosol	80.95	79.81
EER94070	Sorghum	mitochondrion	78.57	79.71
TraesCS4D01G250300.1	Wheat	mitochondrion	25.71	79.41
TraesCS1D01G154700.1	Wheat	mitochondrion	78.1	78.85
TraesCS1B01G173200.1	Wheat	mitochondrion	78.1	78.85
TraesCS1A01G156100.1	Wheat	mitochondrion	78.1	78.85
TraesCS4A01G054500.1	Wheat	mitochondrion	25.24	77.94
Bra009182.1-P	Field mustard	cytosol	77.62	75.81
TraesCS4A01G413200.1	Wheat	mitochondrion	74.29	75.73
TraesCS4D01G310800.1	Wheat	mitochondrion	73.81	75.61
TraesCS4B01G250400.1	Wheat	mitochondrion	73.33	75.12
TraesCS4B01G313800.1	Wheat	mitochondrion	72.86	74.63
Bra017270.1-P	Field mustard	cytosol	68.1	67.14
EES05457	Sorghum	cytosol	77.14	66.39
Zm00001d003013_P001	Maize	cytosol	78.57	66.27
TraesCS2A01G380600.1	Wheat	cytosol	76.67	65.45
Bra011592.1-P	Field mustard	cytosol	72.38	64.96
Zm00001d029127_P001	Maize	mitochondrion	70.0	64.76
TraesCS2D01G376900.1	Wheat	cytosol	75.71	64.63
EES11120	Sorghum	cytosol	79.52	64.48
TraesCS1D01G003500.1	Wheat	cytosol	72.86	64.02
Zm00001d025868_P002	Maize	cytosol	76.67	63.64
Bra020803.1-P	Field mustard	cytosol	69.05	63.6
Bra023351.1-P	Field mustard	cytosol	65.24	63.13
HORVU2Hr1G089620.5	Barley	cytosol	79.05	63.12
Bra008924.1-P	Field mustard	cytosol	64.76	62.96
EER94862	Sorghum	mitochondrion, plastid	64.76	62.1
TraesCS4D01G250200.1	Wheat	mitochondrion	33.33	61.95
Bra036562.1-P	Field mustard	cytosol	54.29	59.38
TraesCS2B01G397600.2	Wheat	cytosol	77.14	57.86
Bra028736.1-P	Field mustard	nucleus	53.33	43.58
Bra028735.1-P	Field mustard	cytosol	21.43	35.71
HORVU4Hr1G079860.4	Barley	cytosol, nucleus	39.52	27.48

Protein Annotations

EnsemblPlants:Bra017202.1	EnsemblPlants:Bra017202.1-P	EnsemblPlantsGene:Bra017202	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF17	PFAM:PF03641	SUPFAM:SSF102405
TIGRFAMs:TIGR00730	UniParc:UPI0002544435	UniProt:M4DL21	MapMan:11.4.1.2	:	:

Description

AT2G37210 (E=6e-114) | Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.

Coordinates

chrA04:-:16062121..16064581

Molecular Weight (calculated)

22940.8 Da

IEP (calculated)

5.959

GRAVY (calculated)

-0.121

Length

210 amino acids

Sequence
(BLAST)

001: MEIKAETMQK SKFKRICVFC GSSQGKKSSY QDAAVDLGNE LVSRKIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSEPT AKELVKKLEE YAPCHESVAS
201: KLCWEMERTG

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.