Factsheet for Bra028735.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003135.1-P	Field mustard	cytosol	31.75	23.95
Bra039788.1-P	Field mustard	cytosol	31.75	23.95
Bra007000.1-P	Field mustard	cytosol	31.75	23.81
Bra023107.1-P	Field mustard	cytosol	36.51	22.33
Bra009182.1-P	Field mustard	cytosol	38.1	22.33
Bra017202.1-P	Field mustard	cytosol	35.71	21.43
GSMUA_Achr8P04060_001	Banana	cytosol	37.3	20.8
GSMUA_Achr2P08380_001	Banana	cytosol	37.3	20.52
Bra011962.1-P	Field mustard	cytosol	34.13	20.19
Bra034399.1-P	Field mustard	cytosol	33.33	19.72
Zm00001d044327_P001	Maize	plastid	39.68	19.38
Bra020803.1-P	Field mustard	cytosol	32.54	17.98
Bra011592.1-P	Field mustard	cytosol	32.54	17.52
Bra023351.1-P	Field mustard	cytosol	30.16	17.51
GSMUA_Achr6P35930_001	Banana	cytosol	30.95	17.49
Os01t0588900-01	Rice	cytosol	33.33	17.36
Bra036562.1-P	Field mustard	cytosol	26.19	17.19
EES03190	Sorghum	cytosol	34.13	17.13
Bra008924.1-P	Field mustard	cytosol	29.37	17.13
Bra017270.1-P	Field mustard	cytosol	28.57	16.9
TraesCS3A01G211100.1	Wheat	cytosol	30.95	16.67
KXG22670	Sorghum	plastid	34.13	16.54
TraesCS3B01G241600.1	Wheat	cytosol	30.95	16.32
TraesCS3D01G213900.1	Wheat	cytosol	30.95	16.18
Os05t0591600-01	Rice	cytosol	33.33	15.79
TraesCS1B01G471300.1	Wheat	cytosol, plastid	31.75	14.93
TraesCS1D01G444500.1	Wheat	cytosol	30.95	14.29
HORVU1Hr1G094290.7	Barley	plastid	30.95	13.59
HORVU3Hr1G050770.10	Barley	mitochondrion	31.75	11.46
Bra028736.1-P	Field mustard	nucleus	15.08	7.39

Protein Annotations

EnsemblPlants:Bra028735.1	EnsemblPlants:Bra028735.1-P	EnsemblPlantsGene:Bra028735	Gene3D:3.40.50.450	ncoils:Coil	PANTHER:PTHR31223
PANTHER:PTHR31223:SF20	SEG:seg	SUPFAM:SSF102405	UniParc:UPI000254317E	UniProt:M4EIX0	MapMan:35.2

Description

AT5G06300 (E=4e-014) | carboxy-lyase

Coordinates

chrA02:-:2321554..2324879

Molecular Weight (calculated)

14767.5 Da

IEP (calculated)

10.193

GRAVY (calculated)

-0.993

Length

126 amino acids

Sequence
(BLAST)

001: MEETKSRFNR ICVFCGSSSG KKPSYQEAAI ELGNELGHPK NLDAKRAGLE LGPVSRPISY TYEEKLEQER EFVTEANKLE KQNQRERDLS RRRSRRRRWR
101: AARDLTKGVS DYRWCISEVI FALVTR

Best Arabidopsis Sequence Match ( AT5G06300.1 )
(BLAST)

001: MEETKSRFKR ICVFCGSSSG KKPSYQEAAI QLGNELVERR IDLVYGGGSV GLMGLVSQAV HHGGRHVLGV IPKTLMPREI TGETIGEVKA VADMHQRKAE
101: MARQADAFIA LPGGYGTLEE LLEVITWAQL GIHRKPVGLL NVDGYYNSLL TFIDKAVDEG FISPMARRII VSAPNAKELV RQLEEYEPEF DEITSKLVWD
201: EVDRISYVPG SEVATAT

Arabidopsis Description

LOG7Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.