Factsheet for TraesCS3D01G213900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G241600.1	Wheat	cytosol	98.76	99.58
TraesCS3A01G211100.1	Wheat	cytosol	95.44	98.29
Os01t0588900-01	Rice	cytosol	85.48	85.12
EES03190	Sorghum	cytosol	82.16	78.88
Zm00001d011246_P002	Maize	cytosol	78.42	74.12
VIT_08s0007g02480.t01	Wine grape	cytosol	64.73	72.22
Solyc01g007270.1.1	Tomato	cytosol	20.75	71.43
KRH32819	Soybean	cytosol	63.07	71.03
GSMUA_Achr8P04060_001	Banana	cytosol	66.39	70.8
KRH72214	Soybean	cytosol	62.66	70.56
GSMUA_Achr2P08380_001	Banana	cytosol	65.98	69.43
KRG96247	Soybean	cytosol	61.0	69.01
KRH67989	Soybean	cytosol	61.0	69.01
TraesCS1D01G444500.1	Wheat	cytosol	77.18	68.13
TraesCS4D01G250300.1	Wheat	mitochondrion	19.09	67.65
CDY04985	Canola	cytosol	60.17	67.44
Solyc10g082020.1.1	Tomato	cytosol	60.58	67.28
TraesCS1D01G154700.1	Wheat	mitochondrion	57.68	66.83
HORVU3Hr1G050770.10	Barley	mitochondrion	96.68	66.76
AT5G06300.1	Thale cress	cytosol	59.75	66.36
PGSC0003DMT400042349	Potato	cytosol	58.92	65.14
TraesCS4D01G310800.1	Wheat	mitochondrion	54.36	63.9
PGSC0003DMT400072345	Potato	cytosol	59.75	63.16
GSMUA_Achr6P35930_001	Banana	cytosol	57.68	62.33
TraesCS2D01G376900.1	Wheat	cytosol	60.17	58.94
TraesCS5D01G568400.1	Wheat	plastid	56.43	57.87
TraesCS1D01G003500.1	Wheat	cytosol	56.02	56.49
TraesCS5D01G353600.1	Wheat	cytosol	57.68	55.82
TraesCS5D01G568500.1	Wheat	cytosol	57.26	55.65
TraesCS1D01G367400.1	Wheat	cytosol	48.96	54.88
TraesCS4D01G250200.1	Wheat	mitochondrion	25.31	53.98
TraesCS3D01G251900.1	Wheat	cytosol	50.62	53.98
TraesCS4D01G033800.1	Wheat	cytosol	48.96	52.44
Bra028735.1-P	Field mustard	cytosol	16.18	30.95

Protein Annotations

EnsemblPlants:TraesCS3D01G213900.1	EnsemblPlantsGene:TraesCS3D01G213900	Gene3D:3.40.50.450	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0048509	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF13	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr3D:-:288110073..288113566

Molecular Weight (calculated)

25738.9 Da

IEP (calculated)

5.013

GRAVY (calculated)

0.010

Length

241 amino acids

Sequence
(BLAST)

001: MAVEAMAEKN TGAGAGAAGG VAPESGDRRS RFRRICVYCG SAKGRKASYQ DAAVELGKEL VERGIDLVYG GGSIGLMGLV SHAVHDGGRH VIGVIPKSLM
101: PREVTGEPVG EVRAVSGMHE RKAEMVRSAD AFIALPGGYG TLDELLEVLT WAQLGIHKKP IGLLNVDGFY NFFLSFIDMA VSEGFIQEDA RHLVISAPTA
201: KELVLKLEEY VPDYEIGLVW EDQGQITHGF APELEPGIAS S

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.