Factsheet for Solyc01g007270.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 2
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400042349	Potato	cytosol	97.14	31.19
KRH67989	Soybean	cytosol	84.29	27.7
KRG96247	Soybean	cytosol	84.29	27.7
KRH72214	Soybean	cytosol	84.29	27.57
KRH32819	Soybean	cytosol	84.29	27.57
VIT_08s0007g02480.t01	Wine grape	cytosol	84.29	27.31
Solyc06g075090.2.1	Tomato	cytosol	74.29	27.23
Bra009182.1-P	Field mustard	cytosol	82.86	26.98
CDY04985	Canola	cytosol	81.43	26.51
Solyc10g082020.1.1	Tomato	cytosol	81.43	26.27
AT5G06300.1	Thale cress	cytosol	81.43	26.27
Solyc09g007830.2.1	Tomato	cytosol	77.14	24.77
Solyc10g084150.1.1	Tomato	cytosol	77.14	24.55
GSMUA_Achr8P04060_001	Banana	cytosol	77.14	23.89
Solyc04g081290.2.1	Tomato	cytosol	75.71	23.56
GSMUA_Achr2P08380_001	Banana	cytosol	75.71	23.14
GSMUA_Achr6P35930_001	Banana	cytosol	71.43	22.42
Solyc11g069570.1.1	Tomato	cytosol	74.29	22.22
Solyc01g005680.2.1	Tomato	mitochondrion	64.29	22.06
TraesCS3A01G211100.1	Wheat	cytosol	71.43	21.37
Os01t0588900-01	Rice	cytosol	72.86	21.07
TraesCS3B01G241600.1	Wheat	cytosol	71.43	20.92
TraesCS3D01G213900.1	Wheat	cytosol	71.43	20.75
Solyc08g062820.2.1	Tomato	cytosol	62.86	20.66
Zm00001d011246_P002	Maize	cytosol	72.86	20.0
EES03190	Sorghum	cytosol	71.43	19.92
KXG22670	Sorghum	plastid	68.57	18.46
Os05t0591600-01	Rice	cytosol	70.0	18.42
Zm00001d039174_P001	Maize	plastid	68.57	18.11
TraesCS1B01G471300.1	Wheat	cytosol, plastid	67.14	17.54
TraesCS1D01G444500.1	Wheat	cytosol	65.71	16.85
HORVU1Hr1G094290.7	Barley	plastid	67.14	16.38
HORVU3Hr1G050770.10	Barley	mitochondrion	71.43	14.33
Zm00001d044327_P001	Maize	plastid	45.71	12.4
Bra028736.1-P	Field mustard	nucleus	12.86	3.5

Protein Annotations

EnsemblPlants:Solyc01g007270.1.1	EnsemblPlantsGene:Solyc01g007270.1	Gene3D:3.40.50.450	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	PANTHER:PTHR31223	PANTHER:PTHR31223:SF24	SEG:seg	SUPFAM:SSF102405	UniParc:UPI00027628F2
UniProt:K4ASU3	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr1:+:1837459..1839036

Molecular Weight (calculated)

7470.0 Da

IEP (calculated)

8.229

GRAVY (calculated)

-0.287

Length

70 amino acids

Sequence
(BLAST)

1: MEEERRSKFK RICVFCGSSS GNKPTYQEAA TELGKQLVEK GIDLVYGGGS VGLMGLVSQA VHDGGRHVLG

Best Arabidopsis Sequence Match ( AT5G06300.1 )
(BLAST)

001: MEETKSRFKR ICVFCGSSSG KKPSYQEAAI QLGNELVERR IDLVYGGGSV GLMGLVSQAV HHGGRHVLGV IPKTLMPREI TGETIGEVKA VADMHQRKAE
101: MARQADAFIA LPGGYGTLEE LLEVITWAQL GIHRKPVGLL NVDGYYNSLL TFIDKAVDEG FISPMARRII VSAPNAKELV RQLEEYEPEF DEITSKLVWD
201: EVDRISYVPG SEVATAT

Arabidopsis Description

LOG7Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.