Factsheet for GSMUA_Achr8P04060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P08380_001	Banana	cytosol	87.17	86.03
Solyc01g007270.1.1	Tomato	cytosol	23.89	77.14
VIT_08s0007g02480.t01	Wine grape	cytosol	73.01	76.39
KRH67989	Soybean	cytosol	71.68	76.06
KRH32819	Soybean	cytosol	71.68	75.7
KRG96247	Soybean	cytosol	71.24	75.59
KRH72214	Soybean	cytosol	71.24	75.23
Solyc10g082020.1.1	Tomato	cytosol	71.24	74.19
CDY04985	Canola	cytosol	70.35	73.95
AT5G06300.1	Thale cress	cytosol	69.91	72.81
PGSC0003DMT400042349	Potato	cytosol	68.58	71.1
GSMUA_Achr6P36490_001	Banana	cytosol	67.7	70.51
PGSC0003DMT400072345	Potato	cytosol	70.35	69.74
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	47.79	69.68
GSMUA_Achr6P35930_001	Banana	cytosol	68.58	69.51
GSMUA_Achr8P19190_001	Banana	cytosol	68.14	68.75
Os01t0588900-01	Rice	cytosol	73.45	68.59
GSMUA_Achr11P...	Banana	cytosol, plastid	65.93	68.04
GSMUA_Achr1P09040_001	Banana	cytosol	65.49	67.89
TraesCS3A01G211100.1	Wheat	cytosol	69.91	67.52
TraesCS3B01G241600.1	Wheat	cytosol	70.8	66.95
TraesCS3D01G213900.1	Wheat	cytosol	70.8	66.39
GSMUA_AchrUn_...	Banana	cytosol	59.29	66.34
EES03190	Sorghum	cytosol	73.01	65.74
GSMUA_Achr2P03620_001	Banana	cytosol	61.95	63.93
GSMUA_Achr7P04070_001	Banana	cytosol	60.18	63.26
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	54.87	62.94
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	60.62	62.56
Os05t0591600-01	Rice	cytosol	73.45	62.41
Zm00001d011246_P002	Maize	cytosol	70.35	62.35
GSMUA_Achr2P00980_001	Banana	cytosol	68.14	62.35
KXG22670	Sorghum	plastid	71.68	62.31
TraesCS1B01G471300.1	Wheat	cytosol, plastid	72.12	60.82
Zm00001d039174_P001	Maize	plastid	70.8	60.38
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	52.21	59.6
TraesCS1D01G444500.1	Wheat	cytosol	71.68	59.34
GSMUA_Achr3P25920_001	Banana	cytosol	55.31	58.41
HORVU1Hr1G094290.7	Barley	plastid	72.57	57.14
GSMUA_Achr8P31460_001	Banana	cytosol	52.65	56.4
GSMUA_AchrUn_...	Banana	cytosol	61.5	56.28
GSMUA_Achr4P03590_001	Banana	plastid	55.75	51.01
GSMUA_Achr2P08480_001	Banana	mitochondrion	56.64	50.59
HORVU3Hr1G050770.10	Barley	mitochondrion	70.35	45.56
Bra028735.1-P	Field mustard	cytosol	20.8	37.3

Protein Annotations

EnsemblPlants:GSMUA_Achr8P04060_001	EnsemblPlants:GSMUA_Achr8T04060_001	EnsemblPlantsGene:GSMUA_Achr8G04060_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF13	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0002964219	UniProt:M0TMF9	MapMan:11.4.1.2	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG [Source:GMGC_GENE;Acc:GSMUA_Achr8G04060_001]

Coordinates

chr8:+:2768914..2772794

Molecular Weight (calculated)

24423.6 Da

IEP (calculated)

5.614

GRAVY (calculated)

0.015

Length

226 amino acids

Sequence
(BLAST)

001: MECTMEAAAA MGVEKASRFR RICVFCGSQC GKKPSYQEAA VELGKELVKN GIDLVYGGGS IGLMGLVSHA VHDGGRHVLG VIPKSLMPKE LTGGTIGEVR
101: AVSDMHERKA EMARQADAFI ALPGGYGTLE ELLEVITWAQ LGIHKKPVGL LNVDGFYNSL LSFLDMAVDE GFISQAARHI IISAHSAKEL LRKLEEYVSE
201: YECTLVWDAE KKPLNFAPEP ESGVAS

Best Arabidopsis Sequence Match ( AT5G06300.1 )
(BLAST)

001: MEETKSRFKR ICVFCGSSSG KKPSYQEAAI QLGNELVERR IDLVYGGGSV GLMGLVSQAV HHGGRHVLGV IPKTLMPREI TGETIGEVKA VADMHQRKAE
101: MARQADAFIA LPGGYGTLEE LLEVITWAQL GIHRKPVGLL NVDGYYNSLL TFIDKAVDEG FISPMARRII VSAPNAKELV RQLEEYEPEF DEITSKLVWD
201: EVDRISYVPG SEVATAT

Arabidopsis Description

LOG7Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.