Factsheet for GSMUA_Achr11P16530_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

cytosol 2
nucleus 1
plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g14030.t01	Wine grape	mitochondrion	81.94	58.8
Solyc04g081290.2.1	Tomato	cytosol	83.87	57.78
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	83.87	57.78
GSMUA_Achr11P...	Banana	cytosol, plastid	80.65	57.08
GSMUA_Achr8P19190_001	Banana	cytosol	81.94	56.7
KRH51716	Soybean	cytosol	80.0	56.11
KRH05931	Soybean	cytosol	76.13	54.88
KRH17410	Soybean	cytosol	74.84	54.46
KRH61054	Soybean	cytosol	78.71	54.22
GSMUA_Achr6P36490_001	Banana	cytosol	75.48	53.92
GSMUA_Achr2P00980_001	Banana	cytosol	84.52	53.04
CDX79649	Canola	cytosol	60.65	50.81
GSMUA_Achr1P09040_001	Banana	cytosol	70.97	50.46
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	67.74	47.95
GSMUA_Achr8P04060_001	Banana	cytosol	69.68	47.79
GSMUA_Achr2P03620_001	Banana	cytosol	67.1	47.49
GSMUA_Achr2P08380_001	Banana	cytosol	69.03	46.72
GSMUA_AchrUn_...	Banana	cytosol	60.65	46.53
CDY40411	Canola	cytosol	62.58	45.54
Bra017270.1-P	Field mustard	cytosol	62.58	45.54
AT2G35990.1	Thale cress	cytosol	62.58	45.54
GSMUA_Achr7P04070_001	Banana	cytosol	62.58	45.12
CDY32063	Canola	cytosol	61.29	44.6
GSMUA_Achr3P25920_001	Banana	cytosol	60.65	43.93
TraesCS4A01G317900.1	Wheat	plastid	69.03	43.67
TraesCS4A01G318100.1	Wheat	plastid	69.68	43.55
TraesCS5B01G561400.1	Wheat	plastid	69.03	43.32
HORVU5Hr1G124750.1	Barley	cytosol	69.03	43.15
Os03t0857900-02	Rice	nucleus	68.39	43.09
TraesCS5D01G568500.1	Wheat	cytosol	68.39	42.74
TraesCS5D01G568400.1	Wheat	plastid	64.52	42.55
TraesCS5B01G561300.1	Wheat	plastid	68.39	42.4
GSMUA_AchrUn_...	Banana	cytosol	67.1	42.11
GSMUA_Achr6P35930_001	Banana	cytosol	58.06	40.36
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	50.32	39.59
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	49.68	38.89
GSMUA_Achr2P08480_001	Banana	mitochondrion	61.94	37.94
GSMUA_Achr8P31460_001	Banana	cytosol	48.39	35.55
EER93059	Sorghum	cytosol	38.71	32.97
GSMUA_Achr4P03590_001	Banana	plastid	52.26	32.79

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr11G16530_001	EnsemblPlants:GSMUA_Achr11P16530_001
EnsemblPlants:GSMUA_Achr11T16530_001	InterPro:LOG	InterPro:LOG_fam	UniProt:M0RST3	PFAM:PF03641	PANTHER:PTHR31223
PANTHER:PTHR31223:SF19	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000294DE16	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G16530_001]

Coordinates

chr11:-:18239840..18241231

Molecular Weight (calculated)

16766.4 Da

IEP (calculated)

5.853

GRAVY (calculated)

0.078

Length

155 amino acids

Sequence
(BLAST)

001: MMAVVMSSGS VIPRTLMPRE ITGEPVGEVR AVSGMHQRKA EMARQADAFI ALPGGYGTLE ELLEVITWAQ LGIHDKPVGL LNVDGYYNSL LSFVDKAVDE
101: GFVAPAARHI IISAHTAHEL LSKLEDYVPM HEGAAAKLSW GVEQLGHPPK VDIAR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.