CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017270.1-P	Field mustard	cytosol	99.06	99.06
CDY32063	Canola	cytosol	97.65	97.65
AT2G35990.1	Thale cress	cytosol	95.31	95.31
CDX79649	Canola	cytosol	79.34	91.35
CDY04985	Canola	cytosol	73.24	72.56
CDX91344	Canola	mitochondrion	66.2	70.85
VIT_18s0001g14030.t01	Wine grape	mitochondrion	70.42	69.44
CDY13293	Canola	cytosol	38.03	68.64
CDX79722	Canola	cytosol	66.2	68.45
KRH05931	Soybean	cytosol	69.01	68.37
CDY46763	Canola	cytosol	65.73	67.96
CDX73553	Canola	cytosol	62.44	67.51
CDY44352	Canola	cytosol	64.32	67.49
CDY62895	Canola	cytosol	62.44	67.17
GSMUA_Achr11P...	Banana	cytosol, plastid	68.54	66.67
KRH17410	Soybean	cytosol	66.67	66.67
CDY52759	Canola	cytosol	67.14	66.51
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	69.48	65.78
Solyc04g081290.2.1	Tomato	cytosol	69.48	65.78
CDY30875	Canola	cytosol	66.2	65.58
CDY30498	Canola	cytosol	65.26	65.26
CDX77168	Canola	cytosol	65.26	65.26
KRH51716	Soybean	cytosol	67.61	65.16
CDX71364	Canola	cytosol	64.32	64.32
CDY04551	Canola	cytosol	64.32	64.32
KRH61054	Soybean	cytosol	67.61	64.0
CDX76213	Canola	cytosol	60.56	63.86
GSMUA_Achr8P19190_001	Banana	cytosol	67.14	63.84
CDX74979	Canola	cytosol	68.08	63.32
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	45.54	62.58
CDX69118	Canola	cytosol	63.85	60.71
TraesCS5D01G568400.1	Wheat	plastid	64.79	58.72
CDX78180	Canola	cytosol	66.2	58.51
Os03t0857900-02	Rice	nucleus	66.67	57.72
TraesCS4A01G317900.1	Wheat	plastid	66.2	57.55
GSMUA_Achr2P00980_001	Banana	cytosol	66.67	57.49
TraesCS5D01G568500.1	Wheat	cytosol	66.67	57.26
HORVU5Hr1G124750.1	Barley	cytosol	66.2	56.85
TraesCS4A01G318100.1	Wheat	plastid	66.2	56.85
CDY52642	Canola	cytosol	62.44	56.84
TraesCS5B01G561300.1	Wheat	plastid	66.67	56.8
TraesCS5B01G561400.1	Wheat	plastid	65.73	56.68
CDY65870	Canola	cytosol	58.22	56.62
CDX76318	Canola	cytosol	60.56	56.58
CDX69717	Canola	cytosol	57.28	56.48
CDX97157	Canola	cytosol	57.28	56.48
CDX91185	Canola	cytosol	58.22	55.36
CDX87066	Canola	cytosol	49.3	54.97
CDY19786	Canola	cytosol	49.3	54.97
EER93059	Sorghum	cytosol	44.13	51.65
CDY17522	Canola	cytosol	53.99	50.22
CDY48150	Canola	mitochondrion	26.76	47.5

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:A0A078HRS4	UniProt:A0A078HRS4	EnsemblPlants:CDY40411	ProteinID:CDY40411
ProteinID:CDY40411.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00069617001	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF24	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0004EECF02

Description

BnaA04g21060DCytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078HRS4]

Coordinates

chrLK032470:-:693..3179

Molecular Weight (calculated)

23194.7 Da

IEP (calculated)

5.278

GRAVY (calculated)

-0.038

Length

213 amino acids

Sequence
(BLAST)

001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVERK IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFVA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPTASQLL HLLEEYVPKH DDFVSKMVWD
201: DITDAPTSEG DSC

Best Arabidopsis Sequence Match ( AT2G35990.1 )
(BLAST)

001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVERN IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF

Arabidopsis Description

LOG2Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.