Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73553 | Canola | cytosol | 96.61 | 57.87 |
| CDX76213 | Canola | cytosol | 96.61 | 56.44 |
| CDY52759 | Canola | cytosol | 100.0 | 54.88 |
| CDX79722 | Canola | cytosol | 94.92 | 54.37 |
| CDY46763 | Canola | cytosol | 92.37 | 52.91 |
| CDY30875 | Canola | cytosol | 95.76 | 52.56 |
| CDX91344 | Canola | mitochondrion | 88.14 | 52.26 |
| CDX78180 | Canola | cytosol | 97.46 | 47.72 |
| CDX74979 | Canola | cytosol | 91.53 | 47.16 |
| GSMUA_Achr6P36490_001 | Banana | cytosol | 85.59 | 46.54 |
| GSMUA_Achr1P09040_001 | Banana | cytosol | 83.9 | 45.41 |
| CDY44352 | Canola | cytosol | 77.97 | 45.32 |
| CDY04985 | Canola | cytosol | 80.51 | 44.19 |
| CDY30498 | Canola | cytosol | 79.66 | 44.13 |
| CDX77168 | Canola | cytosol | 79.66 | 44.13 |
| CDY62895 | Canola | cytosol | 73.73 | 43.94 |
| CDX71364 | Canola | cytosol | 78.81 | 43.66 |
| CDY04551 | Canola | cytosol | 78.81 | 43.66 |
| CDY40411 | Canola | cytosol | 68.64 | 38.03 |
| CDY32063 | Canola | cytosol | 66.95 | 37.09 |
| CDX69118 | Canola | cytosol | 70.34 | 37.05 |
| CDY52642 | Canola | cytosol | 70.34 | 35.47 |
| CDX69717 | Canola | cytosol | 63.56 | 34.72 |
| CDX97157 | Canola | cytosol | 63.56 | 34.72 |
| CDX76318 | Canola | cytosol | 66.95 | 34.65 |
| CDY17522 | Canola | cytosol | 66.1 | 34.06 |
| CDY65870 | Canola | cytosol | 62.71 | 33.79 |
| CDX91185 | Canola | cytosol | 63.56 | 33.48 |
| CDX79649 | Canola | cytosol | 50.85 | 32.43 |
| CDX87066 | Canola | cytosol | 45.76 | 28.27 |
| CDY19786 | Canola | cytosol | 45.76 | 28.27 |
| CDY48150 | Canola | mitochondrion | 2.54 | 2.5 |
Protein Annotations
| Gene3D:3.40.50.450 | MapMan:35.1 | GO:A0A078FLW9 | UniProt:A0A078FLW9 | EnsemblPlants:CDY13293 | ProteinID:CDY13293 |
| ProteinID:CDY13293.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00071276001 | InterPro:LOG | InterPro:LOG_fam |
| PFAM:PF03641 | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF17 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI0004EEFF44 |
Description
BnaC06g14640DCytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078FLW9]
Coordinates
chrLK032034:+:29557..30797
Molecular Weight (calculated)
12618.3 Da
IEP (calculated)
7.579
GRAVY (calculated)
-0.140
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVNTETMQK SKFGRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGVIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMARHS DAFIALPG
101: QRKAEMARHS DAFIALPG
001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVIILL PFLFIYITLY IPNNLK
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVIILL PFLFIYITLY IPNNLK
Arabidopsis Description
LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.