Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023351.1-P | Field mustard | cytosol | 92.86 | 95.85 |
| CDY65870 | Canola | cytosol | 93.3 | 95.43 |
| AT5G11950.1 | Thale cress | cytosol | 89.73 | 93.06 |
| CDX97157 | Canola | cytosol | 88.84 | 92.13 |
| CDX69717 | Canola | cytosol | 87.95 | 91.2 |
| CDY19786 | Canola | cytosol | 70.09 | 82.2 |
| CDX87066 | Canola | cytosol | 70.09 | 82.2 |
| KRH52208 | Soybean | cytosol | 75.45 | 79.34 |
| Solyc08g062820.2.1 | Tomato | cytosol | 73.66 | 77.46 |
| PGSC0003DMT400021223 | Potato | cytosol | 73.21 | 77.0 |
| VIT_04s0008g01040.t01 | Wine grape | cytosol | 74.11 | 76.5 |
| KRH05430 | Soybean | cytosol | 71.88 | 74.54 |
| KRH61527 | Soybean | cytosol | 74.55 | 74.22 |
| GSMUA_Achr3P25920_001 | Banana | cytosol | 66.96 | 70.09 |
| CDY48150 | Canola | mitochondrion | 37.5 | 70.0 |
| CDX91344 | Canola | mitochondrion | 60.27 | 67.84 |
| CDX73553 | Canola | cytosol | 57.14 | 64.97 |
| TraesCS1B01G379700.1 | Wheat | cytosol | 62.05 | 64.65 |
| TraesCS1A01G362500.1 | Wheat | cytosol | 62.05 | 64.65 |
| CDY04551 | Canola | cytosol | 61.16 | 64.32 |
| CDX71364 | Canola | cytosol | 61.16 | 64.32 |
| CDX77168 | Canola | cytosol | 61.16 | 64.32 |
| CDY30498 | Canola | cytosol | 61.16 | 64.32 |
| CDY44352 | Canola | cytosol | 58.04 | 64.04 |
| TraesCS1D01G367400.1 | Wheat | cytosol | 61.16 | 63.72 |
| CDY62895 | Canola | cytosol | 56.25 | 63.64 |
| CDX79722 | Canola | cytosol | 58.48 | 63.59 |
| CDY13293 | Canola | cytosol | 33.48 | 63.56 |
| CDY52759 | Canola | cytosol | 60.71 | 63.26 |
| Os01t0708500-01 | Rice | mitochondrion | 62.95 | 63.23 |
| CDY46763 | Canola | cytosol | 57.59 | 62.62 |
| CDY30875 | Canola | cytosol | 59.82 | 62.33 |
| CDY04985 | Canola | cytosol | 59.82 | 62.33 |
| TraesCS3D01G251900.1 | Wheat | cytosol | 62.5 | 61.95 |
| Os05t0541200-01 | Rice | cytosol, plasma membrane | 61.61 | 61.88 |
| CDX76213 | Canola | cytosol | 55.8 | 61.88 |
| TraesCS3A01G251500.1 | Wheat | plastid | 62.95 | 61.57 |
| TraesCS3B01G281000.1 | Wheat | cytosol | 62.05 | 61.5 |
| EES18588 | Sorghum | cytosol | 63.39 | 61.47 |
| CDX74979 | Canola | cytosol | 60.71 | 59.39 |
| Zm00001d038862_P001 | Maize | cytosol, extracellular | 62.5 | 59.32 |
| Zm00001d043692_P001 | Maize | cytosol | 62.95 | 59.24 |
| GSMUA_Achr2P08480_001 | Banana | mitochondrion | 66.07 | 58.5 |
| CDY40411 | Canola | cytosol | 55.36 | 58.22 |
| CDY32063 | Canola | cytosol | 55.36 | 58.22 |
| CDX78180 | Canola | cytosol | 60.71 | 56.43 |
| CDX69118 | Canola | cytosol | 56.25 | 56.25 |
| CDX79649 | Canola | cytosol | 45.54 | 55.14 |
| CDX76318 | Canola | cytosol | 55.36 | 54.39 |
| OQU87402 | Sorghum | plastid | 63.84 | 54.37 |
| CDY52642 | Canola | cytosol | 56.7 | 54.27 |
| CDY17522 | Canola | cytosol | 49.11 | 48.03 |
| HORVU1Hr1G079570.13 | Barley | plastid | 57.59 | 45.42 |
| HORVU3Hr1G066810.9 | Barley | mitochondrion | 53.12 | 42.65 |
Protein Annotations
| EnsemblPlants:CDX91185 | EnsemblPlantsGene:GSBRNA2T00151990001 | Gene3D:3.40.50.450 | GO:A0A078DPE9 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | InterPro:LOG | InterPro:LOG_fam | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF4 | PFAM:PF03641 | ProteinID:CDX91185 | ProteinID:CDX91185.1 | SEG:seg | SUPFAM:SSF102405 |
| TIGRFAMs:TIGR00730 | UniParc:UPI0004EB213C | MapMan:11.4.1.2 | : | : | : |
Description
BnaC02g04120D
Coordinates
chrLK031865:-:1276298..1277907
Molecular Weight (calculated)
24754.0 Da
IEP (calculated)
6.800
GRAVY (calculated)
-0.188
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDNNKQRS RFRKICVFCG SHSGHREVFS DAAIELGNEL VKRKIDLVYG GGSVGLMGLI SRRVYEGGFH VLGIIPKALM PIEISGETVG DVRVVADMHE
101: RKAAMAQEAE AFIALPGGYG TMEELLEMIT WSQLGIHKKT VGILNVDGYY NSLLALFDTG VEEGFIKPGA RNIVVSAPTA KELMEKMEEY TPSHKHVAAH
201: ESWKVEELGA LPWKTTKQAS IKKH
101: RKAAMAQEAE AFIALPGGYG TMEELLEMIT WSQLGIHKKT VGILNVDGYY NSLLALFDTG VEEGFIKPGA RNIVVSAPTA KELMEKMEEY TPSHKHVAAH
201: ESWKVEELGA LPWKTTKQAS IKKH
001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
Arabidopsis Description
LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.