Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19786 | Canola | cytosol | 87.5 | 54.97 |
| CDX87066 | Canola | cytosol | 86.67 | 54.45 |
| AT5G26140.2 | Thale cress | cytosol | 67.5 | 49.39 |
| Bra036562.1-P | Field mustard | cytosol | 64.17 | 40.1 |
| CDY65870 | Canola | cytosol | 70.83 | 38.81 |
| CDX69717 | Canola | cytosol | 69.17 | 38.43 |
| CDX97157 | Canola | cytosol | 69.17 | 38.43 |
| CDX91185 | Canola | cytosol | 70.0 | 37.5 |
| KRH52208 | Soybean | cytosol | 65.0 | 36.62 |
| VIT_04s0008g01040.t01 | Wine grape | cytosol | 65.83 | 36.41 |
| Solyc08g062820.2.1 | Tomato | cytosol | 64.17 | 36.15 |
| PGSC0003DMT400021223 | Potato | cytosol | 63.33 | 35.68 |
| KRH61527 | Soybean | cytosol | 66.67 | 35.56 |
| KRH05430 | Soybean | cytosol | 63.33 | 35.19 |
| CDX91344 | Canola | mitochondrion | 51.67 | 31.16 |
| GSMUA_Achr3P25920_001 | Banana | cytosol | 55.0 | 30.84 |
| CDY62895 | Canola | cytosol | 50.83 | 30.81 |
| CDY44352 | Canola | cytosol | 51.67 | 30.54 |
| CDY04551 | Canola | cytosol | 54.17 | 30.52 |
| CDX71364 | Canola | cytosol | 54.17 | 30.52 |
| TraesCS1A01G362500.1 | Wheat | cytosol | 54.17 | 30.23 |
| TraesCS1B01G379700.1 | Wheat | cytosol | 54.17 | 30.23 |
| CDX77168 | Canola | cytosol | 53.33 | 30.05 |
| CDY30498 | Canola | cytosol | 53.33 | 30.05 |
| Os01t0708500-01 | Rice | mitochondrion | 55.83 | 30.04 |
| TraesCS1D01G367400.1 | Wheat | cytosol | 53.33 | 29.77 |
| TraesCS3D01G251900.1 | Wheat | cytosol | 55.83 | 29.65 |
| CDY46763 | Canola | cytosol | 50.83 | 29.61 |
| TraesCS3A01G251500.1 | Wheat | plastid | 55.83 | 29.26 |
| TraesCS3B01G281000.1 | Wheat | cytosol | 55.0 | 29.2 |
| CDX79722 | Canola | cytosol | 50.0 | 29.13 |
| CDY52759 | Canola | cytosol | 51.67 | 28.84 |
| Os05t0541200-01 | Rice | cytosol, plasma membrane | 53.33 | 28.7 |
| CDY30875 | Canola | cytosol | 50.83 | 28.37 |
| CDX73553 | Canola | cytosol | 45.83 | 27.92 |
| CDY04985 | Canola | cytosol | 50.0 | 27.91 |
| Zm00001d043692_P001 | Maize | cytosol | 55.0 | 27.73 |
| GSMUA_Achr2P08480_001 | Banana | mitochondrion | 58.33 | 27.67 |
| EES18588 | Sorghum | cytosol | 52.5 | 27.27 |
| CDX69118 | Canola | cytosol | 50.83 | 27.23 |
| CDX79649 | Canola | cytosol | 41.67 | 27.03 |
| CDY40411 | Canola | cytosol | 47.5 | 26.76 |
| CDX76318 | Canola | cytosol | 50.83 | 26.75 |
| CDX74979 | Canola | cytosol | 50.83 | 26.64 |
| CDY32063 | Canola | cytosol | 46.67 | 26.29 |
| Zm00001d038862_P001 | Maize | cytosol, extracellular | 51.67 | 26.27 |
| CDX78180 | Canola | cytosol | 51.67 | 25.73 |
| CDY52642 | Canola | cytosol | 50.0 | 25.64 |
| CDX76213 | Canola | cytosol | 42.5 | 25.25 |
| OQU87402 | Sorghum | plastid | 55.0 | 25.1 |
| HORVU1Hr1G079570.13 | Barley | plastid | 55.83 | 23.59 |
| HORVU3Hr1G066810.9 | Barley | mitochondrion | 54.17 | 23.3 |
| CDY17522 | Canola | cytosol | 40.83 | 21.4 |
| CDY13293 | Canola | cytosol | 2.5 | 2.54 |
Protein Annotations
| EnsemblPlants:CDY48150 | EnsemblPlantsGene:GSBRNA2T00088959001 | Gene3D:3.40.50.450 | InterPro:LOG_fam | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF4 |
| PFAM:PF03641 | ProteinID:CDY48150 | ProteinID:CDY48150.1 | SEG:seg | SUPFAM:SSF102405 | UniParc:UPI0004EEE643 |
| UniProt:A0A078IB97 | MapMan:11.4.1.2 | : | : | : | : |
Description
BnaA06g16830DBnaA06g16830D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078IB97]
Coordinates
chrLK032757:+:93..915
Molecular Weight (calculated)
13377.2 Da
IEP (calculated)
8.474
GRAVY (calculated)
-0.156
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: SLQTCTSAKL QWHKKLRLSL LSLARGYGTM EELLEIITWA QLGIHKKTVG LLNVDGYYNN LLALFDTGVE EGFIKPGARN IVVSAPSAKE LLEKMELYTP
101: SHKHIASHQS WKVEQLAGDS
101: SHKHIASHQS WKVEQLAGDS
001: MVGKVYFLRN SYDFGLRKNG CFLYFIRRYE TMEELLEMIT WAQLGIHKKT VGLLNVDGYY NNLLAFFDTG VEEGFIKQGA CNIVVSAPSA RELMEKMELY
101: TPSHKYIASH QSWKVEPLGD YPLLNENKPQ
101: TPSHKYIASH QSWKVEPLGD YPLLNENKPQ
Arabidopsis Description
LOG9Putative lysine decarboxylase family protein [Source:TAIR;Acc:AT5G26140]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.