Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020803.1-P | Field mustard | cytosol | 99.56 | 99.56 |
| AT4G35190.1 | Thale cress | cytosol | 91.67 | 91.67 |
| CDY17522 | Canola | cytosol | 91.67 | 91.27 |
| CDY52642 | Canola | cytosol | 90.35 | 88.03 |
| CDX69118 | Canola | cytosol | 84.65 | 86.16 |
| VIT_03s0038g03420.t01 | Wine grape | cytosol | 81.14 | 80.79 |
| VIT_18s0001g00210.t01 | Wine grape | cytosol | 77.19 | 80.37 |
| VIT_14s0036g00590.t01 | Wine grape | cytosol, extracellular | 27.19 | 77.5 |
| GSMUA_Achr2P03620_001 | Banana | cytosol | 70.61 | 73.52 |
| CDX91344 | Canola | mitochondrion | 63.16 | 72.36 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.16 | 71.29 |
| GSMUA_Achr1P07310_001 | Banana | cytosol, mitochondrion | 68.42 | 71.23 |
| CDY44352 | Canola | cytosol | 62.28 | 69.95 |
| GSMUA_Achr7P04070_001 | Banana | cytosol | 65.79 | 69.77 |
| CDY04985 | Canola | cytosol | 65.35 | 69.3 |
| CDX79722 | Canola | cytosol | 62.28 | 68.93 |
| CDY46763 | Canola | cytosol | 62.28 | 68.93 |
| CDY62895 | Canola | cytosol | 59.65 | 68.69 |
| CDX71364 | Canola | cytosol | 63.6 | 68.08 |
| CDY04551 | Canola | cytosol | 63.6 | 68.08 |
| CDY30498 | Canola | cytosol | 63.6 | 68.08 |
| CDX77168 | Canola | cytosol | 63.6 | 68.08 |
| CDX73553 | Canola | cytosol | 58.77 | 68.02 |
| Zm00001d021450_P001 | Maize | cytosol | 68.42 | 67.24 |
| CDY13293 | Canola | cytosol | 34.65 | 66.95 |
| CDY52759 | Canola | cytosol | 62.72 | 66.51 |
| EER97131 | Sorghum | cytosol | 68.42 | 66.38 |
| OQU88832 | Sorghum | cytosol, plastid | 65.35 | 65.35 |
| CDY30875 | Canola | cytosol | 61.4 | 65.12 |
| CDX76213 | Canola | cytosol | 55.7 | 62.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 67.98 | 62.75 |
| CDX74979 | Canola | cytosol | 62.72 | 62.45 |
| TraesCS5B01G348400.1 | Wheat | cytosol | 65.79 | 60.98 |
| CDY40411 | Canola | cytosol | 56.58 | 60.56 |
| CDY32063 | Canola | cytosol | 55.7 | 59.62 |
| TraesCS5D01G353600.1 | Wheat | cytosol | 64.91 | 59.44 |
| TraesCS5A01G347400.1 | Wheat | cytosol | 64.04 | 59.35 |
| CDX78180 | Canola | cytosol | 62.28 | 58.92 |
| TraesCS5B01G348300.1 | Wheat | cytosol | 64.47 | 58.8 |
| TraesCS5A01G347500.1 | Wheat | cytosol | 62.72 | 58.37 |
| CDX97157 | Canola | cytosol | 55.26 | 58.33 |
| CDX69717 | Canola | cytosol | 55.26 | 58.33 |
| CDY19786 | Canola | cytosol | 48.68 | 58.12 |
| CDX87066 | Canola | cytosol | 48.68 | 58.12 |
| Os09t0547500-01 | Rice | cytosol, plastid | 57.46 | 57.71 |
| CDX79649 | Canola | cytosol | 46.49 | 57.3 |
| TraesCS5B01G348600.1 | Wheat | cytosol | 60.53 | 57.26 |
| CDY65870 | Canola | cytosol | 53.95 | 56.16 |
| CDX91185 | Canola | cytosol | 54.39 | 55.36 |
| CDY48150 | Canola | mitochondrion | 26.75 | 50.83 |
| KRH32487 | Soybean | cytosol | 3.95 | 47.37 |
Protein Annotations
| MapMan:11.4.1.2 | Gene3D:3.40.50.450 | GO:A0A078CMK2 | EnsemblPlants:CDX76318 | ProteinID:CDX76318 | ProteinID:CDX76318.1 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00126690001 |
| InterPro:LOG | InterPro:LOG_fam | PFAM:PF03641 | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF26 | SUPFAM:SSF102405 |
| TIGRFAMs:TIGR00730 | UniParc:UPI0004EDE194 | SEG:seg | : | : | : |
Description
BnaA08g10820D
Coordinates
chrLK031807:+:332432..334181
Molecular Weight (calculated)
25197.3 Da
IEP (calculated)
5.953
GRAVY (calculated)
-0.118
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIVKSRFKR VCVFCGSSSG NRECYRDAAI DLAQELIKKR LNLVYGGGSI GLMGLVSQAV HEAGCHVLGI IPRTLMDKEI TGETYGEVRA VADMHQRKAE
101: MASHSDCFIA LPGGYGTLEE LLEVITWAQL GIHDKPVGLL NVDGYYDYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYEPVS DGTIAKSKWE
201: AEKKVQQAQQ QQQVVFCSNT SIQTEIAL
101: MASHSDCFIA LPGGYGTLEE LLEVITWAQL GIHDKPVGLL NVDGYYDYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYEPVS DGTIAKSKWE
201: AEKKVQQAQQ QQQVVFCSNT SIQTEIAL
001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL
Arabidopsis Description
LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.