Factsheet for TraesCS5A01G347500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G348600.1	Wheat	cytosol	86.12	87.55
TraesCS5A01G347400.1	Wheat	cytosol	87.35	86.99
EER97131	Sorghum	cytosol	76.33	79.57
Zm00001d021450_P001	Maize	cytosol	74.29	78.45
OQU88832	Sorghum	cytosol, plastid	70.2	75.44
GSMUA_AchrUn_...	Banana	cytosol	61.63	74.75
GSMUA_Achr2P03620_001	Banana	cytosol	64.9	72.6
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	64.08	71.69
Os09t0547500-01	Rice	cytosol, plastid	65.71	70.93
GSMUA_Achr7P04070_001	Banana	cytosol	62.04	70.7
VIT_18s0001g00210.t01	Wine grape	cytosol	61.22	68.49
TraesCS1A01G156100.1	Wheat	mitochondrion	57.55	67.79
VIT_03s0038g03420.t01	Wine grape	cytosol	62.04	66.38
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	21.22	65.0
AT4G35190.1	Thale cress	cytosol	60.41	64.91
TraesCS4A01G413200.1	Wheat	mitochondrion	53.47	63.59
CDX69118	Canola	cytosol	57.96	63.39
GSMUA_AchrUn_...	Banana	cytosol	63.67	63.16
CDX76318	Canola	cytosol	58.37	62.72
Bra020803.1-P	Field mustard	cytosol	57.96	62.28
Bra011592.1-P	Field mustard	cytosol	59.18	61.97
TraesCS4A01G054500.1	Wheat	mitochondrion	17.14	61.76
CDY52642	Canola	cytosol	58.78	61.54
TraesCS3A01G211100.1	Wheat	cytosol	56.33	58.97
TraesCS1A01G362500.1	Wheat	cytosol	51.43	58.6
TraesCS2A01G380600.1	Wheat	cytosol	58.37	58.13
CDY17522	Canola	cytosol	52.65	56.33
TraesCS4A01G317900.1	Wheat	plastid	55.1	55.1
TraesCS3A01G251500.1	Wheat	plastid	50.61	54.15
TraesCS4A01G318100.1	Wheat	plastid	53.88	53.23
TraesCS4A01G277200.1	Wheat	cytosol	46.94	51.8
KRH32487	Soybean	cytosol	3.67	47.37

Protein Annotations

EnsemblPlants:TraesCS5A01G347500.1	EnsemblPlantsGene:TraesCS5A01G347500	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr5A:+:550249573..550251338

Molecular Weight (calculated)

26312.5 Da

IEP (calculated)

4.677

GRAVY (calculated)

-0.001

Length

245 amino acids

Sequence
(BLAST)

001: MRRGGGEMEE TAAAKNRSGS VGEGAVVELE VEVEEGPRFR RVCVFCGSSS GKRSCYRDAA VELGKELVAR GMDLVYGGGS LGLMGEVSEA VHKAGGHVIG
101: VIPTILMGKE ITGETVGEVV AVSGMHERKA AMARNADAFI ALPGGYGTLD ELLEVIAWAQ LGIHTKPVGL LNVDGYYDFL LAFIIDKAVD DGFIRPSQRH
201: IFVSAPDARD LVHKLEEYVA VEEDDPAAPK LLWEIDQHLI NYASQ

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.