Factsheet for TraesCS5D01G353600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G347400.1	Wheat	cytosol	95.18	96.34
TraesCS5B01G348400.1	Wheat	cytosol	93.98	95.12
EER97131	Sorghum	cytosol	79.92	84.68
Zm00001d021450_P001	Maize	cytosol	78.31	84.05
OQU88832	Sorghum	cytosol, plastid	71.89	78.51
GSMUA_Achr2P03620_001	Banana	cytosol	67.07	76.26
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	66.27	75.34
GSMUA_AchrUn_...	Banana	cytosol	59.84	73.76
GSMUA_Achr7P04070_001	Banana	cytosol	61.85	71.63
Os09t0547500-01	Rice	cytosol, plastid	64.66	70.93
VIT_18s0001g00210.t01	Wine grape	cytosol	62.25	70.78
VIT_03s0038g03420.t01	Wine grape	cytosol	64.26	69.87
TraesCS1D01G154700.1	Wheat	mitochondrion	56.63	67.79
AT4G35190.1	Thale cress	cytosol	61.85	67.54
GSMUA_AchrUn_...	Banana	cytosol	64.66	65.18
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	20.88	65.0
CDX76318	Canola	cytosol	59.44	64.91
Bra020803.1-P	Field mustard	cytosol	59.04	64.47
Bra011592.1-P	Field mustard	cytosol	59.44	63.25
CDX69118	Canola	cytosol	56.63	62.95
CDY52642	Canola	cytosol	59.04	62.82
TraesCS4D01G310800.1	Wheat	mitochondrion	51.0	61.95
TraesCS4D01G250300.1	Wheat	mitochondrion	16.87	61.76
CDY17522	Canola	cytosol	53.82	58.52
TraesCS2D01G376900.1	Wheat	cytosol	57.03	57.72
TraesCS3D01G213900.1	Wheat	cytosol	55.82	57.68
TraesCS1D01G367400.1	Wheat	cytosol	49.8	57.67
TraesCS4D01G250200.1	Wheat	mitochondrion	25.3	55.75
TraesCS1D01G003500.1	Wheat	cytosol	53.41	55.65
TraesCS5D01G568400.1	Wheat	plastid	52.21	55.32
TraesCS3D01G251900.1	Wheat	cytosol	49.4	54.42
TraesCS1D01G444500.1	Wheat	cytosol	59.44	54.21
TraesCS5D01G568500.1	Wheat	cytosol	52.61	52.82
TraesCS4D01G033800.1	Wheat	cytosol	47.39	52.44
KRH32487	Soybean	cytosol	3.61	47.37

Protein Annotations

EnsemblPlants:TraesCS5D01G353600.1	EnsemblPlantsGene:TraesCS5D01G353600	Gene3D:3.40.50.450	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr5D:+:435933242..435935086

Molecular Weight (calculated)

26429.7 Da

IEP (calculated)

5.404

GRAVY (calculated)

-0.032

Length

249 amino acids

Sequence
(BLAST)

001: MQGGGGGMEE TPAAVAAAKN RSGGVGEGAA VEVQEGPRFR RVCVFCGSSS GKRSSYRDAA VELGKELVAR RMDLVYGGGS LGLMGEVSEA VHKAGGHVIG
101: VIPTTLMGKE ITGVTVGEVV AVSGMHERKA AMARNADAFI ALPGGYGTLD ELLEVIAWAQ LGIHTKPVGL LNVDGYYDFL LAFIDKAVDD GFIRPSQRHI
201: FVSAPDARDL VRKLEDYVAV EEENPATPKL RWEIEQVGYK ATLQAEIAR

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.