Factsheet for TraesCS5B01G348300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G348400.1	Wheat	cytosol	89.6	91.06
TraesCS5B01G348600.1	Wheat	cytosol	84.8	87.97
EER97131	Sorghum	cytosol	78.8	83.83
Zm00001d021450_P001	Maize	cytosol	77.6	83.62
OQU88832	Sorghum	cytosol, plastid	72.4	79.39
GSMUA_Achr2P03620_001	Banana	cytosol	66.8	76.26
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	65.6	74.89
GSMUA_AchrUn_...	Banana	cytosol	60.0	74.26
GSMUA_Achr7P04070_001	Banana	cytosol	62.4	72.56
VIT_18s0001g00210.t01	Wine grape	cytosol	62.8	71.69
Os09t0547500-01	Rice	cytosol, plastid	63.6	70.04
TraesCS1B01G173200.1	Wheat	mitochondrion	58.0	69.71
VIT_03s0038g03420.t01	Wine grape	cytosol	63.6	69.43
GSMUA_AchrUn_...	Banana	cytosol	65.6	66.4
AT4G35190.1	Thale cress	cytosol	60.4	66.23
TraesCS4B01G250400.1	Wheat	mitochondrion	53.6	65.37
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	20.8	65.0
TraesCS4B01G313800.1	Wheat	mitochondrion	53.2	64.88
CDX76318	Canola	cytosol	58.8	64.47
Bra020803.1-P	Field mustard	cytosol	58.4	64.04
CDX69118	Canola	cytosol	57.2	63.84
Bra011592.1-P	Field mustard	cytosol	59.6	63.68
CDY52642	Canola	cytosol	59.2	63.25
TraesCS1B01G379700.1	Wheat	cytosol	53.2	61.86
TraesCS3B01G241600.1	Wheat	cytosol	56.4	59.0
CDY17522	Canola	cytosol	53.2	58.08
TraesCS3B01G281000.1	Wheat	cytosol	50.0	55.31
TraesCS5B01G561400.1	Wheat	plastid	54.4	55.06
TraesCS5B01G561300.1	Wheat	plastid	54.8	54.8
TraesCS1B01G471300.1	Wheat	cytosol, plastid	57.6	53.73
TraesCS4B01G035700.1	Wheat	cytosol	48.0	53.1
TraesCS2B01G397600.2	Wheat	cytosol	56.8	50.71
KRH32487	Soybean	cytosol	3.2	42.11

Protein Annotations

EnsemblPlants:TraesCS5B01G348300.1	EnsemblPlantsGene:TraesCS5B01G348300	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr5B:+:529608592..529610356

Molecular Weight (calculated)

26178.3 Da

IEP (calculated)

5.157

GRAVY (calculated)

-0.004

Length

250 amino acids

Sequence
(BLAST)

001: MQGGGGCGMG ETAAAAVPAK NHSGGVGEGA GVEVEEGPRF RRVCVFCGSS SGKRSSYRDA AVELAKELVA RGMDLVYGGG SLGLMGEVSE AVHKGGGHVI
101: GVIPTTLMGK EITGETVGEV VAVSGMHERK AAMARNADAF IALPGGYGTL DELLEVITWA QLGIHTKPVG LLNVDGYYDF LLAFIDKAVD DGFIRPSQRH
201: IFVSAPDARD LVHKLEEYAA VEEEDPAAPK LRWEIGQVGY NATLHAGIAR

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.