Factsheet for TraesCS5B01G561400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G317900.1	Wheat	plastid	94.33	95.1
TraesCS5D01G568400.1	Wheat	plastid	84.62	88.94
TraesCS5B01G561300.1	Wheat	plastid	87.85	86.8
Os03t0857900-02	Rice	nucleus	71.26	71.54
GSMUA_Achr8P19190_001	Banana	cytosol	63.16	69.64
VIT_18s0001g14030.t01	Wine grape	mitochondrion	60.73	69.44
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	43.32	69.03
GSMUA_Achr11P...	Banana	cytosol, plastid	59.92	67.58
KRH51716	Soybean	cytosol	59.51	66.52
Solyc04g081290.2.1	Tomato	cytosol	59.92	65.78
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	59.92	65.78
CDY40411	Canola	cytosol	56.68	65.73
Bra017270.1-P	Field mustard	cytosol	56.28	65.26
KRH05931	Soybean	cytosol	56.68	65.12
CDY32063	Canola	cytosol	55.87	64.79
AT2G35990.1	Thale cress	cytosol	55.87	64.79
KRH61054	Soybean	cytosol	58.7	64.44
TraesCS1B01G173200.1	Wheat	mitochondrion	54.25	64.42
KRH17410	Soybean	cytosol	55.47	64.32
TraesCS4B01G250400.1	Wheat	mitochondrion	53.04	63.9
TraesCS4B01G313800.1	Wheat	mitochondrion	53.04	63.9
GSMUA_Achr2P00980_001	Banana	cytosol	62.75	62.75
CDX79649	Canola	cytosol	46.15	61.62
TraesCS1B01G379700.1	Wheat	cytosol	51.82	59.53
TraesCS3B01G241600.1	Wheat	cytosol	56.28	58.16
EER93059	Sorghum	cytosol	42.11	57.14
TraesCS5B01G348400.1	Wheat	cytosol	55.06	55.28
TraesCS3B01G281000.1	Wheat	cytosol	50.2	54.87
TraesCS5B01G348600.1	Wheat	cytosol	53.44	54.77
TraesCS5B01G348300.1	Wheat	cytosol	55.06	54.4
TraesCS1B01G471300.1	Wheat	cytosol, plastid	57.49	52.99
TraesCS4B01G035700.1	Wheat	cytosol	48.18	52.65
TraesCS2B01G397600.2	Wheat	cytosol	59.51	52.5

Protein Annotations

EnsemblPlants:TraesCS5B01G561400.1	EnsemblPlantsGene:TraesCS5B01G561400	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF27	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr5B:+:707475966..707476841

Molecular Weight (calculated)

26072.2 Da

IEP (calculated)

6.629

GRAVY (calculated)

-0.082

Length

247 amino acids

Sequence
(BLAST)

001: MDRDSMEAPT STTAALAMPK PAPASSNNDK KASRFRRVCV FCGSSAGRKA AYQSAAVQLG QQLVERGIDL VYGGGSVGLM GLVSRAVHGG GGRVTGVVPR
101: SVLPRELIGE TPGGEEVKAV SGMHQRKAEM AHRADAFVAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VDGYYDLLLA FIDRAVEEGF VAPAARHIIV
201: AAPTPGELLA ALEEYVPAHH DASSVKLSWE SSVDTRTCSP PKPDMSR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.