Factsheet for TraesCS1B01G379700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G362500.1	Wheat	cytosol	96.74	96.74
TraesCS1D01G367400.1	Wheat	cytosol	94.88	94.88
Os05t0541200-01	Rice	cytosol, plasma membrane	84.19	81.17
TraesCS3B01G281000.1	Wheat	cytosol	77.67	73.89
EES18588	Sorghum	cytosol	77.67	72.29
GSMUA_Achr3P25920_001	Banana	cytosol	69.77	70.09
Zm00001d038862_P001	Maize	cytosol, extracellular	76.74	69.92
AT5G11950.1	Thale cress	cytosol	65.58	65.28
VIT_04s0008g01040.t01	Wine grape	cytosol	65.58	64.98
Bra023351.1-P	Field mustard	cytosol	65.58	64.98
CDX97157	Canola	cytosol	65.12	64.81
Bra008924.1-P	Field mustard	cytosol	65.12	64.81
CDX69717	Canola	cytosol	65.12	64.81
TraesCS1B01G173200.1	Wheat	mitochondrion	62.33	64.42
KRH52208	Soybean	cytosol	63.72	64.32
CDY65870	Canola	cytosol	64.65	63.47
Solyc08g062820.2.1	Tomato	cytosol	62.79	63.38
PGSC0003DMT400021223	Potato	cytosol	62.33	62.91
HORVU1Hr1G079570.13	Barley	plastid	82.79	62.68
CDX91185	Canola	cytosol	64.65	62.05
KRH61527	Soybean	cytosol	64.19	61.33
KRH05430	Soybean	cytosol	61.4	61.11
TraesCS4B01G250400.1	Wheat	mitochondrion	58.14	60.98
CDX87066	Canola	cytosol	53.95	60.73
CDY19786	Canola	cytosol	53.95	60.73
TraesCS4B01G313800.1	Wheat	mitochondrion	57.67	60.49
Bra036562.1-P	Field mustard	cytosol	53.95	60.42
GSMUA_Achr2P08480_001	Banana	mitochondrion	69.77	59.29
TraesCS4B01G035700.1	Wheat	cytosol	59.07	56.19
CDY48150	Canola	mitochondrion	30.23	54.17
TraesCS5B01G348600.1	Wheat	cytosol	60.47	53.94
TraesCS5B01G348300.1	Wheat	cytosol	61.86	53.2
TraesCS5B01G348400.1	Wheat	cytosol	60.0	52.44
TraesCS5B01G561400.1	Wheat	plastid	59.53	51.82
AT5G26140.2	Thale cress	cytosol	38.6	50.61
TraesCS5B01G561300.1	Wheat	plastid	57.67	49.6
TraesCS3B01G241600.1	Wheat	cytosol	54.88	49.37
TraesCS2B01G397600.2	Wheat	cytosol	60.93	46.79
TraesCS1B01G471300.1	Wheat	cytosol, plastid	57.67	46.27

Protein Annotations

EnsemblPlants:TraesCS1B01G379700.1	EnsemblPlantsGene:TraesCS1B01G379700	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF16	PFAM:PF03641	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2	:

Description

No Description!

Coordinates

chr1B:+:612893016..612895142

Molecular Weight (calculated)

23223.1 Da

IEP (calculated)

5.354

GRAVY (calculated)

-0.003

Length

215 amino acids

Sequence
(BLAST)

001: MGDRASCRFR TVCVFCGSSA GKRRVFGDAA LDLGRELVTR GVDLVYGGGS IGLMGLVART VLDGGRRVVG VIPRALMPVE ILGESVGEVK VVSDMHERKA
101: EMARRSEAFI ALPGGYGTME ELLEMITWSQ LGIHNKPVGL LNVDGYYDTL LALFDKGARE GFINPDCTHI LVSAPTATEL LTKMEEYTRS HQEVAPTTSW
201: EISDLGYTKA PPADG

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.