Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023351.1-P | Field mustard | cytosol | 96.3 | 95.85 |
| CDY65870 | Canola | cytosol | 94.91 | 93.61 |
| CDX97157 | Canola | cytosol | 92.13 | 92.13 |
| CDX69717 | Canola | cytosol | 92.13 | 92.13 |
| Bra008924.1-P | Field mustard | cytosol | 92.13 | 92.13 |
| CDX91185 | Canola | cytosol | 93.06 | 89.73 |
| KRH52208 | Soybean | cytosol | 78.7 | 79.81 |
| PGSC0003DMT400021223 | Potato | cytosol | 77.78 | 78.87 |
| Solyc08g062820.2.1 | Tomato | cytosol | 77.78 | 78.87 |
| VIT_04s0008g01040.t01 | Wine grape | cytosol | 78.7 | 78.34 |
| KRH05430 | Soybean | cytosol | 75.93 | 75.93 |
| KRH61527 | Soybean | cytosol | 77.78 | 74.67 |
| GSMUA_Achr3P25920_001 | Banana | cytosol | 69.91 | 70.56 |
| TraesCS1A01G362500.1 | Wheat | cytosol | 65.28 | 65.58 |
| TraesCS1B01G379700.1 | Wheat | cytosol | 65.28 | 65.58 |
| TraesCS1D01G367400.1 | Wheat | cytosol | 64.35 | 64.65 |
| AT5G26140.2 | Thale cress | cytosol | 49.07 | 64.63 |
| Os01t0708500-01 | Rice | mitochondrion | 66.67 | 64.57 |
| AT2G28305.1 | Thale cress | cytosol | 63.43 | 64.32 |
| TraesCS3D01G251900.1 | Wheat | cytosol | 66.67 | 63.72 |
| TraesCS3A01G251500.1 | Wheat | plastid | 67.13 | 63.32 |
| TraesCS3B01G281000.1 | Wheat | cytosol | 66.2 | 63.27 |
| AT5G03270.1 | Thale cress | cytosol | 58.8 | 63.18 |
| Os05t0541200-01 | Rice | cytosol, plasma membrane | 64.81 | 62.78 |
| EES18588 | Sorghum | cytosol | 66.67 | 62.34 |
| AT3G53450.1 | Thale cress | cytosol | 62.04 | 62.33 |
| AT5G06300.1 | Thale cress | cytosol | 61.57 | 61.29 |
| Zm00001d038862_P001 | Maize | cytosol, extracellular | 65.74 | 60.17 |
| Zm00001d043692_P001 | Maize | cytosol | 66.2 | 60.08 |
| GSMUA_Achr2P08480_001 | Banana | mitochondrion | 68.98 | 58.89 |
| AT2G35990.1 | Thale cress | cytosol | 57.41 | 58.22 |
| AT2G37210.2 | Thale cress | cytosol | 63.89 | 57.74 |
| AT4G35190.1 | Thale cress | cytosol | 58.33 | 55.26 |
| OQU87402 | Sorghum | plastid | 67.13 | 55.13 |
| HORVU1Hr1G079570.13 | Barley | plastid | 60.65 | 46.13 |
| HORVU3Hr1G066810.9 | Barley | mitochondrion | 56.48 | 43.73 |
Protein Annotations
| MapMan:11.4.1.2 | PDB:1YDH | PDB:2Q4D | Gene3D:3.40.50.450 | EntrezGene:831068 | UniProt:A0A178UJ28 |
| ProteinID:AED91743.1 | ProteinID:AED91744.1 | EMBL:AK220660 | EMBL:AK227652 | ProteinID:ANM70822.1 | ArrayExpress:AT5G11950 |
| EnsemblPlantsGene:AT5G11950 | RefSeq:AT5G11950 | TAIR:AT5G11950 | RefSeq:AT5G11950-TAIR-G | EnsemblPlants:AT5G11950.1 | TAIR:AT5G11950.1 |
| EMBL:BT006409 | ProteinID:CAB87668.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0042803 | InterPro:LOG | InterPro:LOG_fam | RefSeq:NP_001332403.1 | RefSeq:NP_196756.2 | RefSeq:NP_974768.1 |
| ProteinID:OAO93247.1 | PFAM:PF03641 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF4 | UniProt:Q84MC2 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI0000190A33 | SEG:seg |
Description
LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
Coordinates
chr5:+:3854964..3857243
Molecular Weight (calculated)
23832.8 Da
IEP (calculated)
5.347
GRAVY (calculated)
-0.193
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.