CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G568400.1	Wheat	plastid	57.69	44.68
Os03t0857900-02	Rice	nucleus	59.89	44.31
CDY40411	Canola	cytosol	51.65	44.13
Bra017270.1-P	Field mustard	cytosol	51.1	43.66
CDY32063	Canola	cytosol	51.1	43.66
VIT_18s0001g14030.t01	Wine grape	mitochondrion	51.65	43.52
EER94070	Sorghum	mitochondrion	48.9	43.0
AT2G35990.1	Thale cress	cytosol	50.0	42.72
CDX79649	Canola	cytosol	43.41	42.7
GSMUA_Achr11P...	Banana	cytosol, plastid	51.1	42.47
TraesCS5B01G561400.1	Wheat	plastid	57.14	42.11
GSMUA_Achr8P19190_001	Banana	cytosol	51.65	41.96
TraesCS4A01G317900.1	Wheat	plastid	56.04	41.63
KRH05931	Soybean	cytosol	48.9	41.4
TraesCS5D01G568500.1	Wheat	cytosol	55.49	40.73
HORVU5Hr1G124750.1	Barley	cytosol	55.49	40.73
KRH51716	Soybean	cytosol	49.45	40.72
KRH61054	Soybean	cytosol	50.0	40.44
TraesCS5B01G561300.1	Wheat	plastid	55.49	40.4
TraesCS4A01G318100.1	Wheat	plastid	54.95	40.32
Solyc04g081290.2.1	Tomato	cytosol	49.45	40.0
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	49.45	40.0
KRH17410	Soybean	cytosol	46.15	39.44
OQU88832	Sorghum	cytosol, plastid	48.9	39.04
EER93620	Sorghum	cytosol	49.45	38.79
EER97131	Sorghum	cytosol	50.0	38.72
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	32.97	38.71
GSMUA_Achr2P00980_001	Banana	cytosol	51.65	38.06
EES05457	Sorghum	cytosol	50.0	37.3
EES18588	Sorghum	cytosol	46.7	36.8
EER94862	Sorghum	mitochondrion, plastid	43.96	36.53
EES11120	Sorghum	cytosol	50.0	35.14
EES03190	Sorghum	cytosol	47.8	34.66
OQU87402	Sorghum	plastid	46.7	32.32
KXG22670	Sorghum	plastid	45.05	31.54

Protein Annotations

EnsemblPlants:EER93059	EnsemblPlantsGene:SORBI_3001G004500	EntrezGene:8059249	Gene3D:3.40.50.450	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF27	PFAM:PF03641	ProteinID:EER93059	ProteinID:EER93059.1	RefSeq:XP_002466061.1	SEG:seg
SUPFAM:SSF102405	UniParc:UPI0001A827B4	UniProt:C5WRW9	MapMan:11.4.1.2	:	:

Description

hypothetical protein

Coordinates

chr1:-:391117..392320

Molecular Weight (calculated)

18960.5 Da

IEP (calculated)

5.220

GRAVY (calculated)

-0.149

Length

182 amino acids

Sequence
(BLAST)

001: MMDEEHEQQQ PVPVPVAAEA AVEKDNKKTA KRNNKVCVFC GSSPGVERGM DLVYGGGCAA LMGLVSRAVH DGGGHVLGVV PKAVLPLELI GETPGELKPV
101: AGMHQRKADA LPGGYGIHTK PVGLLNVDGY YDPLLAFVDK AVQEGFVTPL ERTIIVHANT NSSTSSSSSS TTNINADADA DA

Best Arabidopsis Sequence Match ( AT2G35990.1 )
(BLAST)

001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVERN IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF

Arabidopsis Description

LOG2Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.