CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0628000-00	Rice	cytosol	86.07	86.07
GSMUA_Achr6P36490_001	Banana	cytosol	70.9	79.72
KRH22873	Soybean	cytosol	67.62	78.95
KRH26448	Soybean	cytosol	67.21	78.47
Solyc06g075090.2.1	Tomato	cytosol	61.07	78.01
EER94070	Sorghum	mitochondrion	65.98	77.78
PGSC0003DMT400027157	Potato	cytosol	70.08	77.73
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	67.21	77.36
Bra023107.1-P	Field mustard	cytosol	65.16	77.18
Bra017202.1-P	Field mustard	cytosol	66.39	77.14
VIT_08s0040g01780.t01	Wine grape	cytosol	68.85	77.06
Solyc09g007830.2.1	Tomato	cytosol	68.85	77.06
PGSC0003DMT400055525	Potato	cytosol	68.85	77.06
KRH19875	Soybean	cytosol	68.85	76.71
Bra003135.1-P	Field mustard	cytosol	52.46	76.65
Solyc10g084150.1.1	Tomato	cytosol	68.85	76.36
KRH29895	Soybean	cytosol	68.85	76.36
KRG95991	Soybean	cytosol	68.44	76.26
GSMUA_Achr1P09040_001	Banana	cytosol	68.03	76.15
Bra034399.1-P	Field mustard	cytosol	66.39	76.06
KRH67693	Soybean	cytosol	68.03	75.8
Bra011962.1-P	Field mustard	cytosol	65.98	75.59
Bra039788.1-P	Field mustard	cytosol	51.64	75.45
CDY44352	Canola	cytosol	62.7	75.37
CDY62895	Canola	cytosol	61.07	75.25
AT5G03270.1	Thale cress	cytosol	61.89	75.12
Bra007000.1-P	Field mustard	cytosol	51.64	75.0
EES11120	Sorghum	cytosol	79.51	74.9
KRH15578	Soybean	cytosol	22.54	72.37
KRH25030	Soybean	cytosol	68.44	71.67
KRH07771	Soybean	cytosol	20.9	69.86
KRH15614	Soybean	cytosol, extracellular, plastid	19.67	69.57
PGSC0003DMT400020890	Potato	cytosol	64.75	69.3
Solyc11g069570.1.1	Tomato	cytosol	65.16	67.95
EER97131	Sorghum	cytosol	61.89	64.26
KRH32483	Soybean	cytosol, golgi, mitochondrion	46.31	62.43
OQU88832	Sorghum	cytosol, plastid	58.2	62.28
EES03190	Sorghum	cytosol	62.7	60.96
EER94862	Sorghum	mitochondrion, plastid	54.51	60.73
EES18588	Sorghum	cytosol	54.92	58.01
KXG22670	Sorghum	plastid	61.48	57.69
EER93620	Sorghum	cytosol	52.46	55.17
OQU87402	Sorghum	plastid	56.15	52.09
EER93059	Sorghum	cytosol	37.3	50.0

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:8074776	UniProt:C5XXU6	EnsemblPlants:EES05457	ProteinID:EES05457
ProteinID:EES05457.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF28
EnsemblPlantsGene:SORBI_3004G221100	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001A8542D	RefSeq:XP_002452481.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:57150981..57154985

Molecular Weight (calculated)

26992.8 Da

IEP (calculated)

5.723

GRAVY (calculated)

-0.205

Length

244 amino acids

Sequence
(BLAST)

001: MEIKVDEEAA EAVAPLPSRF RRICVFCGSS HGKKRSYQDA AIELGNELVA RNIDLVYGGG SVGLMGSVSQ AVYNGGRHVI GVIPKTLMPR EISGETVGEV
101: KAVADMHQRK AEMARQSDAF IALPGGYGTL EELLEAIAWA QLGIHDKPVG LLNVDGYYDP LLSFIDKAVE EGFIKPTARN IIILAPTPKE LIKKLEEYSP
201: QHEEIVPKMK WEVEQVSYPQ NYKIPRPKEG KMVMEAEVGS RLWM

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.