Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- plastid 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g069570.1.1 | Tomato | cytosol | 95.18 | 92.73 |
| VIT_06s0004g02680.t01 | Wine grape | cytosol, mitochondrion, nucleus | 76.75 | 82.55 |
| KRH22873 | Soybean | cytosol | 74.56 | 81.34 |
| KRH26448 | Soybean | cytosol | 74.12 | 80.86 |
| AT2G28305.1 | Thale cress | cytosol | 75.44 | 80.75 |
| KRH29895 | Soybean | cytosol | 77.63 | 80.45 |
| PGSC0003DMT400055525 | Potato | cytosol | 76.32 | 79.82 |
| CDX71364 | Canola | cytosol | 74.12 | 79.34 |
| Bra011962.1-P | Field mustard | cytosol | 73.25 | 78.4 |
| Bra034399.1-P | Field mustard | cytosol | 73.25 | 78.4 |
| CDY30498 | Canola | cytosol | 73.25 | 78.4 |
| CDY04551 | Canola | cytosol | 73.25 | 78.4 |
| CDX77168 | Canola | cytosol | 73.25 | 78.4 |
| PGSC0003DMT400027157 | Potato | cytosol | 75.44 | 78.18 |
| KRH25030 | Soybean | cytosol | 78.51 | 76.82 |
| Zm00001d014016_P001 | Maize | mitochondrion, nucleus | 69.3 | 76.33 |
| EER94070 | Sorghum | mitochondrion | 68.86 | 75.85 |
| TraesCS1D01G154700.1 | Wheat | mitochondrion | 68.86 | 75.48 |
| TraesCS1B01G173200.1 | Wheat | mitochondrion | 68.86 | 75.48 |
| TraesCS1A01G156100.1 | Wheat | mitochondrion | 68.42 | 75.0 |
| KRH07771 | Soybean | cytosol | 23.25 | 72.6 |
| TraesCS4B01G250400.1 | Wheat | mitochondrion | 64.04 | 71.22 |
| TraesCS4A01G413200.1 | Wheat | mitochondrion | 63.6 | 70.39 |
| TraesCS4D01G310800.1 | Wheat | mitochondrion | 63.16 | 70.24 |
| TraesCS4B01G313800.1 | Wheat | mitochondrion | 63.16 | 70.24 |
| PGSC0003DMT400042349 | Potato | cytosol | 67.11 | 70.18 |
| PGSC0003DMT400009551 | Potato | cytosol, mitochondrion, plastid | 68.42 | 69.33 |
| TraesCS4D01G250300.1 | Wheat | mitochondrion | 20.61 | 69.12 |
| TraesCS4A01G054500.1 | Wheat | mitochondrion | 20.18 | 67.65 |
| PGSC0003DMT400072345 | Potato | cytosol | 66.23 | 66.23 |
| KRH32483 | Soybean | cytosol, golgi, mitochondrion | 52.19 | 65.75 |
| EES05457 | Sorghum | cytosol | 69.3 | 64.75 |
| Zm00001d003013_P001 | Maize | cytosol | 70.18 | 64.26 |
| PGSC0003DMT400081828 | Potato | mitochondrion | 57.46 | 63.9 |
| TraesCS2A01G380600.1 | Wheat | cytosol | 68.86 | 63.82 |
| EES11120 | Sorghum | cytosol | 72.37 | 63.71 |
| PGSC0003DMT400021223 | Potato | cytosol | 59.21 | 63.38 |
| TraesCS2D01G376900.1 | Wheat | cytosol | 67.98 | 63.01 |
| Zm00001d029127_P001 | Maize | mitochondrion | 62.72 | 63.0 |
| Zm00001d025868_P002 | Maize | cytosol | 69.3 | 62.45 |
| TraesCS1D01G003500.1 | Wheat | cytosol | 65.35 | 62.34 |
| TraesCS4D01G250200.1 | Wheat | mitochondrion | 30.7 | 61.95 |
| HORVU2Hr1G089620.5 | Barley | cytosol | 69.74 | 60.46 |
| EER94862 | Sorghum | mitochondrion, plastid | 57.89 | 60.27 |
| TraesCS2B01G397600.2 | Wheat | cytosol | 68.42 | 55.71 |
| Os03t0697200-00 | Rice | nucleus | 34.65 | 32.51 |
| HORVU4Hr1G079860.4 | Barley | cytosol, nucleus | 37.28 | 28.15 |
Protein Annotations
| EntrezGene:102584678 | MapMan:11.4.1.2 | Gene3D:3.40.50.450 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 | InterPro:LOG |
| InterPro:LOG_fam | UniProt:M1AE95 | PFAM:PF03641 | EnsemblPlantsGene:PGSC0003DMG400008088 | PGSC:PGSC0003DMG400008088 | EnsemblPlants:PGSC0003DMT400020890 |
| PANTHER:PTHR31223 | PANTHER:PTHR31223:SF39 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI000295E923 | RefSeq:XP_006340180.1 |
| SEG:seg | : | : | : | : | : |
Description
Carboxy-lyase [Source:PGSC_GENE;Acc:PGSC0003DMG400008088]
Coordinates
chr11:+:41500908..41505845
Molecular Weight (calculated)
25077.3 Da
IEP (calculated)
5.704
GRAVY (calculated)
-0.218
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMEKLEKEM KQSKFKKICV FCGSSPGKKS GYKEAAVELG KELVSRNIDL VYGGGSIGLM GLVSQAVYSG GRHVLGVIPR TLMPREITGE TVGEVKAVAD
101: MHQRKAEMAK HSDAFIALPG GYGTLEELLE VIAWSQLGIH DKPVGLLNVD GYYNSLLAFI DKAVEEGFIC PNARQIFVSA PTAKELINKL EDYFPSQENV
201: ASKLNWEKEE IEEYIPPPNG RCHQASLT
101: MHQRKAEMAK HSDAFIALPG GYGTLEELLE VIAWSQLGIH DKPVGLLNVD GYYNSLLAFI DKAVEEGFIC PNARQIFVSA PTAKELINKL EDYFPSQENV
201: ASKLNWEKEE IEEYIPPPNG RCHQASLT
001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE
Arabidopsis Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.