Factsheet for VIT_13s0064g00740.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
nucleus 1
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	67.44	73.6
GSMUA_Achr8P31460_001	Banana	cytosol	70.7	72.04
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	65.12	70.71
VIT_08s0007g08340.t01	Wine grape	cytosol	71.63	69.37
VIT_06s0004g00590.t01	Wine grape	cytosol, mitochondrion	64.65	67.8
VIT_04s0008g01040.t01	Wine grape	cytosol	68.37	67.74
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	64.65	65.57
VIT_18s0001g14030.t01	Wine grape	mitochondrion	65.12	64.81
VIT_08s0040g01780.t01	Wine grape	cytosol	65.58	64.68
VIT_08s0007g02480.t01	Wine grape	cytosol	63.72	63.43
GSMUA_Achr4P03590_001	Banana	plastid	70.7	61.54
TraesCS4A01G277200.1	Wheat	cytosol	61.86	59.91
VIT_18s0001g00210.t01	Wine grape	cytosol	60.93	59.82
TraesCS4D01G033800.1	Wheat	cytosol	62.33	59.56
TraesCS4B01G035700.1	Wheat	cytosol	61.86	58.85
EER93620	Sorghum	cytosol	62.79	58.19
VIT_03s0038g03420.t01	Wine grape	cytosol	60.93	57.21
Zm00001d033605_P001	Maize	cytosol	61.4	55.46
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	20.0	53.75
HORVU4Hr1G005660.7	Barley	nucleus	47.44	46.15

Protein Annotations

EntrezGene:100248154	wikigene:100248154	MapMan:11.4.1.2	Gene3D:3.40.50.450	ProteinID:CBI24905	ProteinID:CBI24905.3
UniProt:D7T324	EMBL:FN595509	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691
GO:GO:0009987	GO:GO:0016787	EntrezGene:LOC100248154	wikigene:LOC100248154	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF8	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00015CA74D
ArrayExpress:VIT_13s0064g00740	EnsemblPlantsGene:VIT_13s0064g00740	EnsemblPlants:VIT_13s0064g00740.t01	RefSeq:XP_002274747	RefSeq:XP_002274747.1	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:D7T324]

Coordinates

chr13:-:22499777..22501865

Molecular Weight (calculated)

23637.5 Da

IEP (calculated)

5.125

GRAVY (calculated)

-0.159

Length

215 amino acids

Sequence
(BLAST)

001: MEGKENSTSA TNQNKQRFKR ICVFCGSRPG YKSAFSEAAL QLGNLLVERK IDLVYGGGSV GLMGLISQTV FNGGCHVLGV IPRALLPHEI SGETIGEVKT
101: VADMHQRKSE MAKNADAFIA LPGGYGTMEE LLEMITWSQL GIHEKPVGLL NVDGYYNSLL TLFDKGVEEG FIEDSARNIM ISATTAEELI KKMEEYAPVH
201: DRVAPRQTWE VDQLL

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.