Factsheet for VIT_06s0004g00590.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, mitochondrion

Predictor Summary:

cytosol 3
nucleus 1
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081828	Potato	mitochondrion	79.51	79.51
Solyc01g005680.2.1	Tomato	mitochondrion	78.54	78.92
VIT_04s0008g01040.t01	Wine grape	cytosol	73.17	69.12
VIT_13s0064g00740.t01	Wine grape	cytosol	67.8	64.65
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	64.88	62.74
VIT_08s0007g02480.t01	Wine grape	cytosol	64.88	61.57
VIT_18s0001g14030.t01	Wine grape	mitochondrion	63.9	60.65
VIT_08s0040g01780.t01	Wine grape	cytosol	63.9	60.09
VIT_18s0001g00210.t01	Wine grape	cytosol	63.41	59.36
VIT_08s0007g08340.t01	Wine grape	cytosol	63.41	58.56
VIT_03s0038g03420.t01	Wine grape	cytosol	62.44	55.9
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	19.02	48.75

Protein Annotations

EntrezGene:100248535	wikigene:100248535	MapMan:11.4.1.2	Gene3D:3.40.50.450	EMBL:AM440566	ProteinID:CAN65050
ProteinID:CAN65050.1	ProteinID:CBI16523	ProteinID:CBI16523.3	UniProt:D7SLJ5	EMBL:FN594951	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EntrezGene:LOC100248535
wikigene:LOC100248535	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF15
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001BE0DA4	ArrayExpress:VIT_06s0004g00590	EnsemblPlantsGene:VIT_06s0004g00590	EnsemblPlants:VIT_06s0004g00590.t01
RefSeq:XP_002285716	RefSeq:XP_002285716.2	SEG:seg	:	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:D7SLJ5]

Coordinates

chr6:+:760094..764191

Molecular Weight (calculated)

22189.8 Da

IEP (calculated)

5.630

GRAVY (calculated)

0.018

Length

205 amino acids

Sequence
(BLAST)

001: MGKFKRVCVY CGSNSGNRKI FSDAALDLGR EMVERRMDLI YGGGSVGLMG LVSQKVYDGG CHVLGVIPRA LVPIEISGHA VGQVVIVSDM HERKAEMASR
101: ADAFIALPGG YGTMEELLEV IAWAQLGIHD KPVGLLNVDG YYDCLLGLFD KGVEEGFIKP SARSIVVSAK TARELIQKME DYIPFHDQVA PTQSWNAGEP
201: NATNS

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.