CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32950	Soybean	cytosol	77.58	84.39
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	65.47	74.11
KRH15578	Soybean	cytosol	23.77	69.74
GSMUA_Achr8P31460_001	Banana	cytosol	64.57	68.25
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	59.64	67.17
VIT_08s0007g08340.t01	Wine grape	cytosol	66.82	67.12
KRH26448	Soybean	cytosol	62.33	66.51
KRH22873	Soybean	cytosol	61.88	66.03
KRH29895	Soybean	cytosol	63.23	64.09
KRG95991	Soybean	cytosol	62.78	63.93
KRH19875	Soybean	cytosol	62.78	63.93
KRH67693	Soybean	cytosol	62.33	63.47
KRH52208	Soybean	cytosol	60.54	63.38
KRH17410	Soybean	cytosol	60.09	62.91
KRH05931	Soybean	cytosol	60.54	62.79
KRH05430	Soybean	cytosol	60.54	62.5
KRH15614	Soybean	cytosol, extracellular, plastid	19.28	62.32
KRH51716	Soybean	cytosol	60.09	60.63
KRH25030	Soybean	cytosol	63.23	60.52
GSMUA_Achr4P03590_001	Banana	plastid	66.82	60.32
KRH67989	Soybean	cytosol	57.4	60.09
KRG96247	Soybean	cytosol	57.4	60.09
TraesCS4D01G033800.1	Wheat	cytosol	60.54	60.0
TraesCS4A01G277200.1	Wheat	cytosol	59.64	59.91
KRH32819	Soybean	cytosol	57.4	59.81
KRH61054	Soybean	cytosol	60.09	59.56
KRH61527	Soybean	cytosol	60.09	59.56
KRH72214	Soybean	cytosol	56.95	59.35
TraesCS4B01G035700.1	Wheat	cytosol	60.09	59.29
EER93620	Sorghum	cytosol	60.54	58.19
KRH32483	Soybean	cytosol, golgi, mitochondrion	45.74	56.35
Zm00001d033605_P001	Maize	cytosol	59.19	55.46
KRH07771	Soybean	cytosol	17.94	54.79
HORVU4Hr1G005660.7	Barley	nucleus	43.95	44.34
KRH32487	Soybean	cytosol	3.59	42.11

Protein Annotations

EntrezGene:100811032	MapMan:11.4.1.2	Gene3D:3.40.50.450	EMBL:ACUP02006013	EnsemblPlantsGene:GLYMA_09G229100	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	UniProt:I1L5N4
EnsemblPlants:KRH39935	ProteinID:KRH39935	ProteinID:KRH39935.1	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641
PANTHER:PTHR31223	PANTHER:PTHR31223:SF8	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00023382F1	:

Description

hypothetical protein

Coordinates

chr9:-:45312153..45313644

Molecular Weight (calculated)

24683.0 Da

IEP (calculated)

6.606

GRAVY (calculated)

-0.060

Length

223 amino acids

Sequence
(BLAST)

001: MEEVKVSPEN KHKGRFQRIC VFCGSRVGYK SSFSDAALEL GKLLVERKID LVYGGGRLGL MGLISQTVLK GGRHVLGVIP KALLPLEISG ETFGEVKTVA
101: NMHERKSVMA KHADAFIALP GGYGTMEELL EVIAWSQLGI HDKPVGLLNV DGYFHSLLSL FDKGVEEGFI DNSARHIVVI ADTAEELIKR MEEYVPNHHK
201: VATRQSWARD QLLFEPTETG EIL

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.