Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX94304 | Canola | nucleus | 40.89 | 71.4 |
| CDX89318 | Canola | nucleus | 52.03 | 56.39 |
| Bra026415.1-P | Field mustard | nucleus | 55.31 | 50.54 |
| VIT_19s0015g00430.t01 | Wine grape | nucleus | 39.45 | 50.25 |
| AT5G55660.1 | Thale cress | nucleus | 50.98 | 50.0 |
| PGSC0003DMT400037344 | Potato | endoplasmic reticulum, vacuole | 18.48 | 40.52 |
| KRG98507 | Soybean | nucleus | 37.88 | 39.32 |
| Solyc07g065490.2.1 | Tomato | nucleus | 32.24 | 38.8 |
| PGSC0003DMT400057390 | Potato | extracellular, nucleus | 34.34 | 38.36 |
| KRH46360 | Soybean | nucleus | 36.44 | 37.57 |
| Solyc10g006000.2.1 | Tomato | nucleus | 26.87 | 37.0 |
| KRH46364 | Soybean | nucleus | 37.09 | 35.07 |
| KRG98502 | Soybean | nucleus | 33.03 | 34.52 |
| Bra010432.1-P | Field mustard | nucleus | 50.59 | 34.13 |
| CDX97358 | Canola | nucleus | 51.64 | 32.48 |
| AT3G48710.1 | Thale cress | nucleus | 18.48 | 30.52 |
| AT5G63550.2 | Thale cress | nucleus | 19.53 | 28.06 |
| GSMUA_Achr9P09250_001 | Banana | endoplasmic reticulum, golgi | 11.53 | 27.41 |
| Zm00001d033159_P001 | Maize | nucleus | 15.86 | 27.07 |
| EER91265 | Sorghum | nucleus | 22.67 | 26.82 |
| Os03t0596900-01 | Rice | nucleus | 24.51 | 26.6 |
| Zm00001d013757_P010 | Maize | nucleus | 22.54 | 26.34 |
| TraesCS4B01G148100.1 | Wheat | nucleus | 24.51 | 19.24 |
| TraesCS4D01G153300.1 | Wheat | nucleus | 25.03 | 19.06 |
| TraesCS4A01G137900.1 | Wheat | nucleus | 23.85 | 18.61 |
| HORVU4Hr1G035250.1 | Barley | nucleus | 24.12 | 18.57 |
| OQU91413 | Sorghum | nucleus | 20.18 | 11.4 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:35.2 | EntrezGene:828770 | ProteinID:AEE85228.1 | ProteinID:AEE85229.1 | ArrayExpress:AT4G26630 |
| EnsemblPlantsGene:AT4G26630 | RefSeq:AT4G26630 | TAIR:AT4G26630 | RefSeq:AT4G26630-TAIR-G | EnsemblPlants:AT4G26630.1 | TAIR:AT4G26630.1 |
| Unigene:At.43273 | ProteinID:CAB43859.1 | ProteinID:CAB79518.1 | ncoils:Coil | InterPro:DEK_C | GO:GO:0003674 |
| GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006338 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0042393 | GO:GO:0045892 | GO:GO:2000779 | RefSeq:NP_001031724.1 |
| RefSeq:NP_194393.3 | PFAM:PF08766 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR13468 | PANTHER:PTHR13468:SF8 | UniProt:Q9SUA1 | SUPFAM:SSF109715 |
| UniParc:UPI00000A4CDA | SEG:seg | : | : | : | : |
Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9SUA1]
Coordinates
chr4:-:13430405..13435770
Molecular Weight (calculated)
85253.5 Da
IEP (calculated)
4.717
GRAVY (calculated)
-1.528
Length
763 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEDTKATIE PTANKTTSLE KPSEAMAGKE NAGGKETQEL AKDEDMAEPD NMEIDAQIKK DDEKAETEDK ESEVKKNEDN AETQKMEEKV EVTKDEGQAE
101: ATNMDEDADG KKEQTDDGVS VEDTVMKENV ESKDNNYAKD DEKETKETDI TEADHKKAGK EDIQHEADKA NGTKDGNTGD IKEEGTLVDE DKGTDMDEKV
201: ENGDENKQVE NVEGKEKEDK EENKTKEVEA AKAEVDESKV EDEKEGSEDE NDNEKVESKD AKEDEKEETN DDKEDEKEES KGSKKRGKGT SSGGKVREKN
301: KTEEVKKDAE PRTPFSDRPV RERKSVERLV ALIDKDSSKE FRVEKGRGAY LKDIPNVANK VMRKRSDETL KLLHPILFGG RRGKAAQIKT NILGFSGFVW
401: HGDEKKAKEK VKEKLEKCTK EKLWEFCDVL DIHITKATTK KEDIITKLFE FLEKPHVTGD VTGDTTVSEK EKSSKGAKRK RTPKKTSPTA GSSSSKRSAK
501: SQKKSEEATK VVKKSLAHSD DESEEEKEEE EKQEEEKAEE KEEKKEEENE NGIPDKSEDE APQPSESEEK DESEEHSEEE TTKKKRGSRL SAGKKESAGR
601: ARNKKAVVAA KSSPPEKITQ KRSSAKRKKT DDDSDTSPKA SSKRKKSENP IKASPAPSKS ASKEKPVKRA GKGKDKPSDK VLKNAIVEIL KRVDFSTATF
701: TDILKELAKE FTEDLTPRKS SIKMIIQEEL TKLADEEEEE EKKEEDSEKE EAGGSGGGEE VKA
101: ATNMDEDADG KKEQTDDGVS VEDTVMKENV ESKDNNYAKD DEKETKETDI TEADHKKAGK EDIQHEADKA NGTKDGNTGD IKEEGTLVDE DKGTDMDEKV
201: ENGDENKQVE NVEGKEKEDK EENKTKEVEA AKAEVDESKV EDEKEGSEDE NDNEKVESKD AKEDEKEETN DDKEDEKEES KGSKKRGKGT SSGGKVREKN
301: KTEEVKKDAE PRTPFSDRPV RERKSVERLV ALIDKDSSKE FRVEKGRGAY LKDIPNVANK VMRKRSDETL KLLHPILFGG RRGKAAQIKT NILGFSGFVW
401: HGDEKKAKEK VKEKLEKCTK EKLWEFCDVL DIHITKATTK KEDIITKLFE FLEKPHVTGD VTGDTTVSEK EKSSKGAKRK RTPKKTSPTA GSSSSKRSAK
501: SQKKSEEATK VVKKSLAHSD DESEEEKEEE EKQEEEKAEE KEEKKEEENE NGIPDKSEDE APQPSESEEK DESEEHSEEE TTKKKRGSRL SAGKKESAGR
601: ARNKKAVVAA KSSPPEKITQ KRSSAKRKKT DDDSDTSPKA SSKRKKSENP IKASPAPSKS ASKEKPVKRA GKGKDKPSDK VLKNAIVEIL KRVDFSTATF
701: TDILKELAKE FTEDLTPRKS SIKMIIQEEL TKLADEEEEE EKKEEDSEKE EAGGSGGGEE VKA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.