Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46360 | Soybean | nucleus | 66.39 | 65.95 |
| KRG98502 | Soybean | nucleus | 61.63 | 62.05 |
| KRH46364 | Soybean | nucleus | 66.94 | 60.97 |
| VIT_19s0015g00430.t01 | Wine grape | nucleus | 43.67 | 53.59 |
| PGSC0003DMT400037344 | Potato | endoplasmic reticulum, vacuole | 22.72 | 47.99 |
| CDX94304 | Canola | nucleus | 28.44 | 47.83 |
| Solyc07g065490.2.1 | Tomato | nucleus | 36.73 | 42.59 |
| PGSC0003DMT400057390 | Potato | extracellular, nucleus | 38.91 | 41.87 |
| Solyc10g006000.2.1 | Tomato | nucleus | 31.02 | 41.16 |
| CDX89318 | Canola | nucleus | 36.87 | 38.49 |
| CDY06563 | Canola | nucleus | 35.65 | 38.14 |
| AT4G26630.1 | Thale cress | nucleus | 39.32 | 37.88 |
| AT5G55660.1 | Thale cress | nucleus | 39.86 | 37.66 |
| Bra026415.1-P | Field mustard | nucleus | 41.09 | 36.17 |
| KRH41110 | Soybean | nucleus | 23.54 | 35.52 |
| KRH63796 | Soybean | nucleus | 24.76 | 34.02 |
| Bra035582.1-P | Field mustard | nucleus | 36.73 | 34.01 |
| CDY28645 | Canola | nucleus | 36.46 | 33.8 |
| KRH54152 | Soybean | nucleus | 25.03 | 33.52 |
| KRH59791 | Soybean | nucleus | 23.81 | 33.27 |
| CDY20754 | Canola | nucleus | 35.37 | 32.75 |
| CDY17352 | Canola | extracellular, vacuole | 35.24 | 31.28 |
| EER91265 | Sorghum | nucleus | 27.35 | 31.16 |
| Bra002880.1-P | Field mustard | endoplasmic reticulum | 36.6 | 31.1 |
| GSMUA_Achr9P09250_001 | Banana | endoplasmic reticulum, golgi | 13.47 | 30.84 |
| Os03t0596900-01 | Rice | nucleus | 28.44 | 29.73 |
| Zm00001d013757_P010 | Maize | nucleus | 26.26 | 29.56 |
| Zm00001d033159_P001 | Maize | nucleus | 17.28 | 28.41 |
| CDX97358 | Canola | nucleus | 38.64 | 23.41 |
| Bra010432.1-P | Field mustard | nucleus | 35.24 | 22.9 |
| TraesCS4B01G148100.1 | Wheat | nucleus | 28.57 | 21.6 |
| TraesCS4A01G137900.1 | Wheat | nucleus | 27.48 | 20.65 |
| TraesCS4D01G153300.1 | Wheat | nucleus | 28.03 | 20.56 |
| HORVU4Hr1G035250.1 | Barley | nucleus | 27.35 | 20.28 |
| OQU91413 | Sorghum | nucleus | 21.77 | 11.84 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100818537 | MapMan:35.2 | UniProt:A0A0R0EXM7 | EMBL:ACUP02010893 | ncoils:Coil |
| InterPro:DEK_C | EnsemblPlantsGene:GLYMA_18G077700 | GO:GO:0003674 | GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006338 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0042393 | GO:GO:2000779 | EnsemblPlants:KRG98507 | ProteinID:KRG98507 | ProteinID:KRG98507.1 | ProteinID:KRG98508.1 |
| PFAM:PF08766 | PANTHER:PTHR13468 | PANTHER:PTHR13468:SF8 | SUPFAM:SSF109715 | UniParc:UPI0003DEC65C | SEG:seg |
Description
hypothetical protein
Coordinates
chr18:-:7388519..7397522
Molecular Weight (calculated)
83062.3 Da
IEP (calculated)
4.858
GRAVY (calculated)
-1.430
Length
735 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEEEPANEV SKIDSNGKSL QKIILDEITE KEDLETDGGK VLENNGIKEL KENIVKEIED KKTDSVEKVE EDKKVGVVEE AKEDKKEDGV KEAKEDKKED
101: GVKEAKEDKK EGVEEATEDK KEDGVEEVNE DRKEDGVGEV KEDKEVDGVS CVKEVEEDGE VDGVKKVEDK KGDELKEIEE DKKDDHISEN DKMDEDTEIK
201: ETMEGEPENG KEESEKPVVD AMEVEGGIKE KEESKENEKV EVVMEEDEKD EDEDKDNIDK SKEEKAEDSK GEKGSKKRGR GKINGEKVKE KRKELKKTEP
301: RTPTIDRPVR ERKSVERLVA SIDKDATKEF HIQKGRGTPL KDIPNVAFKL SRRKTDDTFK LLHTILFGRR GKAVEIKSNI SRFSGFVWRD NEEKQMIKVK
401: EKLDKCNKEK LLEFCDVLDI TINKATTRKE DIIAKLIDFL VAPHATTTVL LAEKEKPSKG TKRKRVVKRG SSRSGTTSRR SVKRQKKNED STVARRKSAS
501: DTDESEEDKK DEENEEENEI GVADKSEDET PEKSESEDKS DSGSESEDIK EKKKPSKTSS TKKESAKKSK NEKITVPNKS RSPPKRAPKK PSSNLSKSDE
601: DSDESPKVFS RKKKNEKGGK QKTATPTKSA SKEKTAEKVT RGKGKKKEKS SPSDNQLRDA ICEILKEVNF NTATFTDILK KLAKQFDMDL TPRKASIKSM
701: IQEELTKLAD EADDEDREED AEKDEAPSTG QEVEG
101: GVKEAKEDKK EGVEEATEDK KEDGVEEVNE DRKEDGVGEV KEDKEVDGVS CVKEVEEDGE VDGVKKVEDK KGDELKEIEE DKKDDHISEN DKMDEDTEIK
201: ETMEGEPENG KEESEKPVVD AMEVEGGIKE KEESKENEKV EVVMEEDEKD EDEDKDNIDK SKEEKAEDSK GEKGSKKRGR GKINGEKVKE KRKELKKTEP
301: RTPTIDRPVR ERKSVERLVA SIDKDATKEF HIQKGRGTPL KDIPNVAFKL SRRKTDDTFK LLHTILFGRR GKAVEIKSNI SRFSGFVWRD NEEKQMIKVK
401: EKLDKCNKEK LLEFCDVLDI TINKATTRKE DIIAKLIDFL VAPHATTTVL LAEKEKPSKG TKRKRVVKRG SSRSGTTSRR SVKRQKKNED STVARRKSAS
501: DTDESEEDKK DEENEEENEI GVADKSEDET PEKSESEDKS DSGSESEDIK EKKKPSKTSS TKKESAKKSK NEKITVPNKS RSPPKRAPKK PSSNLSKSDE
601: DSDESPKVFS RKKKNEKGGK QKTATPTKSA SKEKTAEKVT RGKGKKKEKS SPSDNQLRDA ICEILKEVNF NTATFTDILK KLAKQFDMDL TPRKASIKSM
701: IQEELTKLAD EADDEDREED AEKDEAPSTG QEVEG
001: MGEDTKATIE PTANKTTSLE KPSEAMAGKE NAGGKETQEL AKDEDMAEPD NMEIDAQIKK DDEKAETEDK ESEVKKNEDN AETQKMEEKV EVTKDEGQAE
101: ATNMDEDADG KKEQTDDGVS VEDTVMKENV ESKDNNYAKD DEKETKETDI TEADHKKAGK EDIQHEADKA NGTKDGNTGD IKEEGTLVDE DKGTDMDEKV
201: ENGDENKQVE NVEGKEKEDK EENKTKEVEA AKAEVDESKV EDEKEGSEDE NDNEKVESKD AKEDEKEETN DDKEDEKEES KGSKKRGKGT SSGGKVREKN
301: KTEEVKKDAE PRTPFSDRPV RERKSVERLV ALIDKDSSKE FRVEKGRGAY LKDIPNVANK VMRKRSDETL KLLHPILFGG RRGKAAQIKT NILGFSGFVW
401: HGDEKKAKEK VKEKLEKCTK EKLWEFCDVL DIHITKATTK KEDIITKLFE FLEKPHVTGD VTGDTTVSEK EKSSKGAKRK RTPKKTSPTA GSSSSKRSAK
501: SQKKSEEATK VVKKSLAHSD DESEEEKEEE EKQEEEKAEE KEEKKEEENE NGIPDKSEDE APQPSESEEK DESEEHSEEE TTKKKRGSRL SAGKKESAGR
601: ARNKKAVVAA KSSPPEKITQ KRSSAKRKKT DDDSDTSPKA SSKRKKSENP IKASPAPSKS ASKEKPVKRA GKGKDKPSDK VLKNAIVEIL KRVDFSTATF
701: TDILKELAKE FTEDLTPRKS SIKMIIQEEL TKLADEEEEE EKKEEDSEKE EAGGSGGGEE VKA
101: ATNMDEDADG KKEQTDDGVS VEDTVMKENV ESKDNNYAKD DEKETKETDI TEADHKKAGK EDIQHEADKA NGTKDGNTGD IKEEGTLVDE DKGTDMDEKV
201: ENGDENKQVE NVEGKEKEDK EENKTKEVEA AKAEVDESKV EDEKEGSEDE NDNEKVESKD AKEDEKEETN DDKEDEKEES KGSKKRGKGT SSGGKVREKN
301: KTEEVKKDAE PRTPFSDRPV RERKSVERLV ALIDKDSSKE FRVEKGRGAY LKDIPNVANK VMRKRSDETL KLLHPILFGG RRGKAAQIKT NILGFSGFVW
401: HGDEKKAKEK VKEKLEKCTK EKLWEFCDVL DIHITKATTK KEDIITKLFE FLEKPHVTGD VTGDTTVSEK EKSSKGAKRK RTPKKTSPTA GSSSSKRSAK
501: SQKKSEEATK VVKKSLAHSD DESEEEKEEE EKQEEEKAEE KEEKKEEENE NGIPDKSEDE APQPSESEEK DESEEHSEEE TTKKKRGSRL SAGKKESAGR
601: ARNKKAVVAA KSSPPEKITQ KRSSAKRKKT DDDSDTSPKA SSKRKKSENP IKASPAPSKS ASKEKPVKRA GKGKDKPSDK VLKNAIVEIL KRVDFSTATF
701: TDILKELAKE FTEDLTPRKS SIKMIIQEEL TKLADEEEEE EKKEEDSEKE EAGGSGGGEE VKA
Arabidopsis Description
DEK domain-containing chromatin associated protein [Source:UniProtKB/TrEMBL;Acc:Q9SUA1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.