CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40665	Soybean	nucleus	86.84	86.69
VIT_08s0056g00640.t01	Wine grape	nucleus	58.12	59.65
AT3G08670.1	Thale cress	mitochondrion	49.91	51.5
PGSC0003DMT400005965	Potato	nucleus	48.38	50.09
Solyc06g054690.2.1	Tomato	nucleus	47.52	49.29
CDY00658	Canola	nucleus	45.3	49.07
Bra029708.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	46.67	48.23
CDX73938	Canola	nucleus	44.27	47.96
Bra001348.1-P	Field mustard	nucleus	43.59	47.13
KRH09557	Soybean	mitochondrion	39.83	47.07
CDY27987	Canola	nucleus	46.67	44.83
CDY35995	Canola	nucleus	46.32	44.65
KRH64866	Soybean	cytosol	32.99	42.51
GSMUA_Achr6P25180_001	Banana	cytosol	40.17	40.52
GSMUA_Achr3P09700_001	Banana	cytosol	31.11	38.08
KXG22223	Sorghum	nucleus	35.04	35.53
Zm00001d038489_P001	Maize	nucleus	34.87	35.29
TraesCS3D01G336100.1	Wheat	nucleus	32.82	34.78
TraesCS3A01G342200.1	Wheat	nucleus	32.82	34.78
HORVU3Hr1G080730.1	Barley	nucleus	32.65	34.73
Zm00001d043074_P001	Maize	cytosol	32.82	34.72
TraesCS3B01G374300.1	Wheat	nucleus	32.48	34.42
TraesCS1A01G302000.1	Wheat	nucleus	35.9	34.31
EES01661	Sorghum	nucleus	32.14	33.81
Zm00001d010620_P001	Maize	nucleus	33.33	33.8
Os05t0480600-01	Rice	cytosol	34.02	33.73
Zm00001d012515_P002	Maize	nucleus	31.62	33.58
TraesCS1B01G311900.2	Wheat	nucleus	35.73	32.81
Os01t0819000-02	Rice	nucleus	30.77	31.09
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	22.05	26.27
KRH00210	Soybean	nucleus	23.08	26.21
KRH49356	Soybean	nucleus	22.91	26.02
KRG97756	Soybean	nucleus	26.32	25.62
KRH31123	Soybean	nucleus	25.64	24.23
KRH14961	Soybean	nucleus	25.13	22.01
KRH73177	Soybean	nucleus	25.3	21.39
KRH42634	Soybean	nucleus	19.83	9.87
KRH31435	Soybean	nucleus	18.46	9.37
KRG97456	Soybean	nucleus	18.12	9.17
KRH58738	Soybean	nucleus	12.14	8.16

Protein Annotations

EMBL:ACUP02011451	EnsemblPlants:KRH00491	EnsemblPlantsGene:GLYMA_18G216300	EntrezGene:100797203	PANTHER:PTHR31949	PANTHER:PTHR31949:SF2
ProteinID:KRH00491	ProteinID:KRH00491.1	SEG:seg	UniParc:UPI00023D9785	UniProt:I1N3B2	MapMan:35.2

Description

hypothetical protein

Coordinates

chr18:-:50326165..50331008

Molecular Weight (calculated)

62482.1 Da

IEP (calculated)

11.305

GRAVY (calculated)

-0.820

Length

585 amino acids

Sequence
(BLAST)

001: MMSGRNVRES LLGSLNHHRR GHSFNGVANN NHHHDDNLDL FSDNRRSLAL AASSDDSSDV SVKLGRLSVG TAKPVRSGID DLLSSTEGGK HDYDWLLTPP
101: GTPVFPSEGE SQTTLAPPRR SLTRSTSTSK ASRLAVSQSE NNPPSRPARS SSVTRSSIST SHSQYSSYSS NRHSSSILNT SSASVSSYIR PSSPVTHSSS
201: AARPSTPSSR PTASRSSTPS KPRSVSTNST AEKNRPSSQG SRPSTPSSRP HIPANLHSPS ASSTRSLSRP STPTRRSSMP SLSPSPSPTT GSLTSAGRVS
301: SNGRSSAPAS RPSSPSPRVR PPPQPIVPPD FPLETPPNLR TTLPDRPVSA GRSRPGGVTM KANVSETQAS PVTMPRRHSS PIVSRGRVTE PAAKTRGYSN
401: GHHADASEPR KVSHAPEVAA RKSIRSSTTA PDNTGFGRTI SKKSLDMAIK HMDIRNSSGN IRSLSSTTLF PQSIRTSTSK SHRVSSAPAS VDMNGSMISS
501: KNGANFDVGN GIDRNMMMKG RDADERQYSA KLSEVDIYES SRYDALLFKE DLKNTNWLHG ADDKCDQGPI FDNGFEHLPE PFGLL

Best Arabidopsis Sequence Match ( AT3G08670.1 )
(BLAST)

001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL

Arabidopsis Description

At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.