Factsheet for Bra001348.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73938	Canola	nucleus	88.54	88.7
CDY00658	Canola	nucleus	86.69	86.85
Bra029708.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	65.8	62.9
VIT_08s0056g00640.t01	Wine grape	nucleus	50.09	47.54
KRH40665	Soybean	nucleus	48.61	44.88
Solyc06g054690.2.1	Tomato	nucleus	46.77	44.86
PGSC0003DMT400005965	Potato	nucleus	46.77	44.78
KRH00491	Soybean	mitochondrion, nucleus	47.13	43.59
KRH09557	Soybean	mitochondrion	34.2	37.37
GSMUA_Achr3P09700_001	Banana	cytosol	31.61	35.77
KRH64866	Soybean	cytosol	29.57	35.24
GSMUA_Achr6P25180_001	Banana	cytosol	37.15	34.66
Zm00001d043074_P001	Maize	cytosol	30.5	29.84
KXG22223	Sorghum	nucleus	31.79	29.81
Zm00001d038489_P001	Maize	nucleus	31.79	29.76
TraesCS3A01G342200.1	Wheat	nucleus	29.94	29.35
Zm00001d012515_P002	Maize	nucleus	29.76	29.22
Os05t0480600-01	Rice	cytosol	31.79	29.15
HORVU3Hr1G080730.1	Barley	nucleus	29.57	29.09
TraesCS3D01G336100.1	Wheat	nucleus	29.57	28.99
EES01661	Sorghum	nucleus	29.76	28.96
TraesCS3B01G374300.1	Wheat	nucleus	29.21	28.62
Zm00001d010620_P001	Maize	nucleus	30.5	28.6
TraesCS1A01G302000.1	Wheat	nucleus	30.31	26.8
Os01t0819000-02	Rice	nucleus	27.73	25.91
TraesCS1B01G311900.2	Wheat	nucleus	29.94	25.43
Bra034046.1-P	Field mustard	nucleus	23.66	24.85
Bra028894.1-P	Field mustard	nucleus	22.92	24.51
Bra029739.1-P	Field mustard	nucleus	23.84	24.39
Bra004992.1-P	Field mustard	nucleus	26.43	24.28
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	21.63	23.83
Bra000164.1-P	Field mustard	nucleus	26.8	23.81
Bra017135.1-P	Field mustard	nucleus	12.94	18.32
Bra010916.1-P	Field mustard	nucleus	20.52	10.32
Bra032851.1-P	Field mustard	nucleus	21.26	10.2

Protein Annotations

EnsemblPlants:Bra001348.1	EnsemblPlants:Bra001348.1-P	EnsemblPlantsGene:Bra001348	PANTHER:PTHR31949	PANTHER:PTHR31949:SF2	SEG:seg
UniParc:UPI0002540622	UniProt:M4CAW9	MapMan:35.2	:	:	:

Description

AT3G08670 (E=8e-105) | unknown protein

Coordinates

chrA03:-:15949500..15952615

Molecular Weight (calculated)

57772.9 Da

IEP (calculated)

11.876

GRAVY (calculated)

-0.828

Length

541 amino acids

Sequence
(BLAST)

001: MNRNLRESVS GGRNAPAISQ FRRGSNNGFS RDSDENLDLF SKIRRSFPLS STDHLPDVSA KLGRLSVGSK PTAKGKGGDD LLSSAEVGKN DYDWLLTPPG
101: TPLGNDSHSS LAPPKVTSSA RASSASKTSR LSVSQSETSY HPSRPARSSS LTRPSVSNSG RLPSSILNTS SASVSSYIRP SSPSSRSSSS ARTPTPTPTR
201: TTSLSRASTP SRIRPVSSTS SLDKTRPSLV SRPSTPTSRT QSNSPNVVSS RPNSRPSTPT RRNTSTSATN GRTAPSLSRP SSPGQPRVRT TTTTNTQQPI
301: VLPDFSLDAP PNLRTTLPGR PISAGRSRPV AAKASPEPKG PMTRRNSSPV VTRGRLIESQ GKGRLSGNGQ QHNTGAPEPR RISNVSDVTS RRTVRTSSTV
401: MDNNNGLGRS LSKSSLDMAI KHMDIRNGKS NGCALSSTTL FPQSIRQASS KIQPIRSGNS LSDSISSNSA ENGNEANEGR RLMGKSSDMN MYESSRYDAF
501: LLKEDVKNTN WLHSIDDRSS EHGLMFDNGG FELLPEPFAP L

Best Arabidopsis Sequence Match ( AT3G08670.1 )
(BLAST)

001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL

Arabidopsis Description

At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.