Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005965 | Potato | nucleus | 96.81 | 96.64 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 52.48 | 51.93 |
| AT3G08670.1 | Thale cress | mitochondrion | 50.0 | 49.74 |
| CDY00658 | Canola | nucleus | 47.34 | 49.44 |
| CDX73938 | Canola | nucleus | 45.92 | 47.96 |
| KRH40665 | Soybean | nucleus | 49.82 | 47.95 |
| KRH00491 | Soybean | mitochondrion, nucleus | 49.29 | 47.52 |
| Bra001348.1-P | Field mustard | nucleus | 44.86 | 46.77 |
| Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 46.63 | 46.47 |
| CDY35995 | Canola | nucleus | 46.28 | 43.0 |
| CDY27987 | Canola | nucleus | 45.57 | 42.2 |
| KRH09557 | Soybean | mitochondrion | 35.82 | 40.81 |
| KRH64866 | Soybean | cytosol | 31.74 | 39.43 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 39.54 | 38.45 |
| GSMUA_Achr3P09700_001 | Banana | cytosol | 30.14 | 35.56 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 32.8 | 33.51 |
| TraesCS3A01G342200.1 | Wheat | nucleus | 32.45 | 33.15 |
| Zm00001d043074_P001 | Maize | cytosol | 32.27 | 32.91 |
| HORVU3Hr1G080730.1 | Barley | nucleus | 32.09 | 32.91 |
| TraesCS3B01G374300.1 | Wheat | nucleus | 32.09 | 32.79 |
| Zm00001d038489_P001 | Maize | nucleus | 33.51 | 32.7 |
| KXG22223 | Sorghum | nucleus | 33.33 | 32.58 |
| Zm00001d010620_P001 | Maize | nucleus | 33.33 | 32.58 |
| Os05t0480600-01 | Rice | cytosol | 34.04 | 32.54 |
| Zm00001d012515_P002 | Maize | nucleus | 31.56 | 32.3 |
| EES01661 | Sorghum | nucleus | 31.74 | 32.19 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 34.93 | 32.19 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 35.82 | 31.71 |
| Os01t0819000-02 | Rice | nucleus | 32.27 | 31.43 |
| Solyc03g096090.2.1 | Tomato | plastid | 21.99 | 25.51 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 21.45 | 24.64 |
| Solyc09g014490.2.1 | Tomato | nucleus | 22.87 | 24.11 |
| Solyc05g014640.2.1 | Tomato | nucleus | 20.21 | 10.07 |
Protein Annotations
| EnsemblPlants:Solyc06g054690.2.1 | EnsemblPlantsGene:Solyc06g054690.2 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | PANTHER:PTHR31949 |
| PANTHER:PTHR31949:SF2 | SEG:seg | UniParc:UPI0002765D76 | UniProt:K4C6F5 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6:-:37442361..37446131
Molecular Weight (calculated)
60319.6 Da
IEP (calculated)
11.285
GRAVY (calculated)
-0.871
Length
564 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRSFRDSLI TGKNFPISSQ HRRGLSLNGA SREPDDHLDL FSKSRRSVSV ASSDETDVTV KLGRLSIGSV KQLKSGLEDL LASTEGEKHD YDWLLTPPGT
101: PLVPTSDGSE SKPASVGPRG SSLGRSSSTT KASRLSVSHS ESNTPARPTR SNSVTRPSIS SSQYSTYSNK SGSILNTSSA SVSSYIRPST PTRRSSSSAR
201: PSTPTSRATV SRPSTPSKAG QAPSTSRPTQ SSRPSTPTSR PQISGNLNTP SRPTSRPSTP TRRTITASLS PASRSSTPAG RPVTNGRTAA SLSRPSSPSP
301: QVRRPSQPIV PPDFSLETPP NLRTTLPDRP LSAGRSRPNP SVTTKGNAET PSVANPRRQS SPIVSRGRLT EPAGRGRALG SGQLSDISDS RRASHVSDLS
401: TRKPVKTAAD NMGLGRTISK KSLDVAIRHM DIRNGNGVRP TSGSTLFPHS IRSTNGKGQP SHGSTGASSF NENASYHYNG NLPENGNYLN RSSENGSEEA
501: KPQHSAKLTD IDIYESSRYD KLLLKEDMKN TNWLHSIDDK SDQETIFGNG FELLPEPFSP LQYL
101: PLVPTSDGSE SKPASVGPRG SSLGRSSSTT KASRLSVSHS ESNTPARPTR SNSVTRPSIS SSQYSTYSNK SGSILNTSSA SVSSYIRPST PTRRSSSSAR
201: PSTPTSRATV SRPSTPSKAG QAPSTSRPTQ SSRPSTPTSR PQISGNLNTP SRPTSRPSTP TRRTITASLS PASRSSTPAG RPVTNGRTAA SLSRPSSPSP
301: QVRRPSQPIV PPDFSLETPP NLRTTLPDRP LSAGRSRPNP SVTTKGNAET PSVANPRRQS SPIVSRGRLT EPAGRGRALG SGQLSDISDS RRASHVSDLS
401: TRKPVKTAAD NMGLGRTISK KSLDVAIRHM DIRNGNGVRP TSGSTLFPHS IRSTNGKGQP SHGSTGASSF NENASYHYNG NLPENGNYLN RSSENGSEEA
501: KPQHSAKLTD IDIYESSRYD KLLLKEDMKN TNWLHSIDDK SDQETIFGNG FELLPEPFSP LQYL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.