Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00658 | Canola | nucleus | 93.33 | 93.33 |
| Bra001348.1-P | Field mustard | nucleus | 88.7 | 88.54 |
| CDY35995 | Canola | nucleus | 67.22 | 59.8 |
| CDY27987 | Canola | nucleus | 66.48 | 58.95 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 51.48 | 48.77 |
| PGSC0003DMT400005965 | Potato | nucleus | 48.33 | 46.19 |
| Solyc06g054690.2.1 | Tomato | nucleus | 47.96 | 45.92 |
| KRH00491 | Soybean | mitochondrion, nucleus | 47.96 | 44.27 |
| KRH40665 | Soybean | nucleus | 47.96 | 44.2 |
| KRH09557 | Soybean | mitochondrion | 34.81 | 37.98 |
| GSMUA_Achr3P09700_001 | Banana | cytosol | 32.22 | 36.4 |
| KRH64866 | Soybean | cytosol | 30.19 | 35.9 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 37.41 | 34.83 |
| Zm00001d038489_P001 | Maize | nucleus | 32.78 | 30.62 |
| KXG22223 | Sorghum | nucleus | 32.59 | 30.5 |
| Zm00001d043074_P001 | Maize | cytosol | 31.11 | 30.38 |
| TraesCS3A01G342200.1 | Wheat | nucleus | 30.93 | 30.25 |
| HORVU3Hr1G080730.1 | Barley | nucleus | 30.56 | 30.0 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 30.56 | 29.89 |
| TraesCS3B01G374300.1 | Wheat | nucleus | 30.19 | 29.53 |
| Zm00001d012515_P002 | Maize | nucleus | 30.0 | 29.4 |
| EES01661 | Sorghum | nucleus | 30.19 | 29.32 |
| Os05t0480600-01 | Rice | cytosol | 31.85 | 29.15 |
| Zm00001d010620_P001 | Maize | nucleus | 31.11 | 29.12 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 31.48 | 27.78 |
| Os01t0819000-02 | Rice | nucleus | 29.07 | 27.12 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 31.3 | 26.53 |
| CDY22176 | Canola | nucleus | 25.0 | 26.16 |
| CDY53090 | Canola | nucleus | 24.26 | 25.69 |
| CDY44674 | Canola | nucleus | 25.0 | 25.52 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 22.04 | 24.24 |
| CDY20509 | Canola | cytosol | 26.85 | 24.13 |
| CDY55901 | Canola | nucleus | 22.41 | 23.91 |
| CDY48118 | Canola | nucleus | 22.41 | 23.91 |
| CDY07628 | Canola | nucleus | 26.67 | 23.65 |
| CDX74811 | Canola | nucleus | 25.74 | 23.64 |
| CDY60338 | Canola | nucleus | 26.67 | 23.61 |
| CDX93325 | Canola | nucleus | 13.7 | 22.29 |
| CDY18403 | Canola | nucleus | 13.52 | 19.11 |
| CDX90111 | Canola | nucleus | 19.81 | 10.08 |
| CDY27635 | Canola | nucleus | 20.19 | 9.67 |
| CDX84901 | Canola | mitochondrion, nucleus | 20.0 | 9.47 |
| CDY11763 | Canola | nucleus | 17.96 | 9.01 |
Protein Annotations
| EnsemblPlants:CDX73938 | EnsemblPlantsGene:GSBRNA2T00111666001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF2 | ProteinID:CDX73938 | ProteinID:CDX73938.1 |
| SEG:seg | UniParc:UPI0004EDB99D | MapMan:35.2 | : | : | : |
Description
BnaA03g31090D
Coordinates
chrLK031800:+:621986..625268
Molecular Weight (calculated)
57757.9 Da
IEP (calculated)
11.750
GRAVY (calculated)
-0.841
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRNLRESVS GGRNAPAISQ FRRGSNNGFS RDSDENLDLF SKIRRSFPLS STDHLPDVSA KLGRLSVGSK PTAKGKGGDD LLSSAEVGKN DYDWLLTPPG
101: TPLGNDSHSS LAPPKVTSSA RASSASKTSR LSVSQSETSY HPSRPARSSS LTRPSVSNSG RSPSSILNTS SASVSSYIRP SSPSSRSSSS ARTPTPTRTT
201: SLSRASTPSR IRPVSSTSSL DKTRPSLGSR PSTPTSRTQS NSPNVVSSRP NSRPSTPTRR NTSTSATNGR TAPSLSRPSS PGQPRVRTTT TTNTQQPIVL
301: PDFSLDAPPN LRTSLPGRPI SAGRSRPVAA KASPEPKGPM TRRNSSPVVT RGRLIESQGK GRLSGNGQQH NIYAPEPRRI SNVSEVTSRR TLKTSSTVMD
401: NNNNGLGRSL SKSSLDMAIK HMDIRNGKSN GCALSSTTLF PQSIRQASSK IQPIHSGNSL SDSISSNSAE NGNEANEGRR LMGKLSDRDM YESSRYDAFL
501: LKEDVKNTNW LHSIDDRSSE HGLMFDNGGF ELLPEPFAPL
101: TPLGNDSHSS LAPPKVTSSA RASSASKTSR LSVSQSETSY HPSRPARSSS LTRPSVSNSG RSPSSILNTS SASVSSYIRP SSPSSRSSSS ARTPTPTRTT
201: SLSRASTPSR IRPVSSTSSL DKTRPSLGSR PSTPTSRTQS NSPNVVSSRP NSRPSTPTRR NTSTSATNGR TAPSLSRPSS PGQPRVRTTT TTNTQQPIVL
301: PDFSLDAPPN LRTSLPGRPI SAGRSRPVAA KASPEPKGPM TRRNSSPVVT RGRLIESQGK GRLSGNGQQH NIYAPEPRRI SNVSEVTSRR TLKTSSTVMD
401: NNNNGLGRSL SKSSLDMAIK HMDIRNGKSN GCALSSTTLF PQSIRQASSK IQPIHSGNSL SDSISSNSAE NGNEANEGRR LMGKLSDRDM YESSRYDAFL
501: LKEDVKNTNW LHSIDDRSSE HGLMFDNGGF ELLPEPFAPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.