Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35995 | Canola | nucleus | 88.18 | 88.47 |
| AT3G08670.1 | Thale cress | mitochondrion | 67.49 | 72.49 |
| CDX73938 | Canola | nucleus | 58.95 | 66.48 |
| CDY00658 | Canola | nucleus | 58.95 | 66.48 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 44.83 | 47.89 |
| KRH00491 | Soybean | mitochondrion, nucleus | 44.83 | 46.67 |
| Solyc06g054690.2.1 | Tomato | nucleus | 42.2 | 45.57 |
| PGSC0003DMT400005965 | Potato | nucleus | 42.2 | 45.49 |
| KRH40665 | Soybean | nucleus | 43.02 | 44.71 |
| KRH09557 | Soybean | mitochondrion | 30.21 | 37.17 |
| KRH64866 | Soybean | cytosol | 27.42 | 36.78 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 33.83 | 35.52 |
| GSMUA_Achr3P09700_001 | Banana | cytosol | 27.59 | 35.15 |
| Zm00001d038489_P001 | Maize | nucleus | 31.03 | 32.7 |
| KXG22223 | Sorghum | nucleus | 30.87 | 32.58 |
| Zm00001d043074_P001 | Maize | cytosol | 29.06 | 32.01 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 28.41 | 31.34 |
| TraesCS3A01G342200.1 | Wheat | nucleus | 28.24 | 31.16 |
| EES01661 | Sorghum | nucleus | 28.41 | 31.12 |
| HORVU3Hr1G080730.1 | Barley | nucleus | 28.08 | 31.09 |
| Zm00001d012515_P002 | Maize | nucleus | 28.08 | 31.03 |
| Zm00001d010620_P001 | Maize | nucleus | 29.23 | 30.85 |
| Os05t0480600-01 | Rice | cytosol | 29.72 | 30.68 |
| TraesCS3B01G374300.1 | Wheat | nucleus | 27.59 | 30.43 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 30.21 | 30.07 |
| Os01t0819000-02 | Rice | nucleus | 28.24 | 29.71 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 29.56 | 28.26 |
| CDY22176 | Canola | nucleus | 23.32 | 27.52 |
| CDY53090 | Canola | nucleus | 22.33 | 26.67 |
| CDY44674 | Canola | nucleus | 22.66 | 26.09 |
| CDX74811 | Canola | nucleus | 24.79 | 25.68 |
| CDY20509 | Canola | cytosol | 25.29 | 25.62 |
| CDY48118 | Canola | nucleus | 21.18 | 25.49 |
| CDY55901 | Canola | nucleus | 21.02 | 25.3 |
| CDY07628 | Canola | nucleus | 24.79 | 24.79 |
| CDY60338 | Canola | nucleus | 24.63 | 24.59 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 19.21 | 23.83 |
| CDX93325 | Canola | nucleus | 11.49 | 21.08 |
| CDY18403 | Canola | nucleus | 11.33 | 18.06 |
| CDX90111 | Canola | nucleus | 20.03 | 11.5 |
| CDY11763 | Canola | nucleus | 18.55 | 10.5 |
| CDY27635 | Canola | nucleus | 19.38 | 10.47 |
| CDX84901 | Canola | mitochondrion, nucleus | 18.55 | 9.91 |
Protein Annotations
| EnsemblPlants:CDY27987 | EnsemblPlantsGene:GSBRNA2T00038911001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF2 | ProteinID:CDY27987 | ProteinID:CDY27987.1 |
| SEG:seg | UniParc:UPI0004EE4EB0 | UniProt:A0A078GS68 | MapMan:35.2 | : | : |
Description
BnaC05g43890DBnaC05g43890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS68]
Coordinates
chrLK032213:-:96074..99708
Molecular Weight (calculated)
64812.0 Da
IEP (calculated)
11.515
GRAVY (calculated)
-0.770
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDEGKMNMQ RDKLLESTIV SNSFSTYSLD SRASLSPATT MNRNLRESLA GGRNTPAISQ FRRGSNNNII SQNGFSRDSD ENLDLFSKIR RSFPLSSSDE
101: LPDVSAKLGR LSVGSKPAPR GKGDDLLSSA EGGKNDYDWL LTPPGTPLGN DSHSSLAAPK ITPSARASSA SKASRLSISQ SETSYHSTRP ARSSSVTRPS
201: LSTSQYSSFT SNRSPSSILN TSSASVSSYI RPSSPSSRSS SSARPSTPTR TSSASRASTP SRIRPGSSSS SMDKPRPSLS SRPSTPTSRP QITANSPNIV
301: ASRPNSRPST PTRRTPSISS ASATSGSNIS SGRGAANGRV TPSLSRPSSP GPRVRTTPQQ PIVLADFPLD TPPNLRTSLQ GRPVSAGRSR PAAGSSITAK
401: ASPEPKGPLT RRNSSPVVTR GRVAETQGKG RYGGGNGLQH HMDAPEPRRI SNVADVTSRR TLKTSSTVAD NNNGLGRSFS KNSLDMAIRH MDIRNGKSNG
501: CALSTTTLFP QSIRQASSKI QPIRSVNNHS DSISSSSAEN GNEANEGRRL MGKLSDMDMY ESSRYDALLL KEDVKNTNWL HSIDDRSSDH GLMFDNGGFE
601: LLPEPFGPL
101: LPDVSAKLGR LSVGSKPAPR GKGDDLLSSA EGGKNDYDWL LTPPGTPLGN DSHSSLAAPK ITPSARASSA SKASRLSISQ SETSYHSTRP ARSSSVTRPS
201: LSTSQYSSFT SNRSPSSILN TSSASVSSYI RPSSPSSRSS SSARPSTPTR TSSASRASTP SRIRPGSSSS SMDKPRPSLS SRPSTPTSRP QITANSPNIV
301: ASRPNSRPST PTRRTPSISS ASATSGSNIS SGRGAANGRV TPSLSRPSSP GPRVRTTPQQ PIVLADFPLD TPPNLRTSLQ GRPVSAGRSR PAAGSSITAK
401: ASPEPKGPLT RRNSSPVVTR GRVAETQGKG RYGGGNGLQH HMDAPEPRRI SNVADVTSRR TLKTSSTVAD NNNGLGRSFS KNSLDMAIRH MDIRNGKSNG
501: CALSTTTLFP QSIRQASSKI QPIRSVNNHS DSISSSSAEN GNEANEGRRL MGKLSDMDMY ESSRYDALLL KEDVKNTNWL HSIDDRSSDH GLMFDNGGFE
601: LLPEPFGPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.