Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G342200.1 | Wheat | nucleus | 97.27 | 96.92 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 96.55 | 96.2 |
| TraesCS3B01G374300.1 | Wheat | nucleus | 92.18 | 91.85 |
| Zm00001d043074_P001 | Maize | cytosol | 67.27 | 66.91 |
| EES01661 | Sorghum | nucleus | 67.27 | 66.55 |
| Zm00001d012515_P002 | Maize | nucleus | 63.82 | 63.7 |
| Os01t0819000-02 | Rice | nucleus | 66.91 | 63.56 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 43.27 | 41.03 |
| KRH00491 | Soybean | mitochondrion, nucleus | 34.73 | 32.65 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 33.64 | 32.46 |
| KRH09557 | Soybean | mitochondrion | 29.09 | 32.32 |
| PGSC0003DMT400005965 | Potato | nucleus | 33.09 | 32.21 |
| Solyc06g054690.2.1 | Tomato | nucleus | 32.91 | 32.09 |
| KRH40665 | Soybean | nucleus | 34.0 | 31.91 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 28.36 | 31.77 |
| AT3G08670.1 | Thale cress | mitochondrion | 32.18 | 31.22 |
| Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 31.45 | 30.57 |
| CDX73938 | Canola | nucleus | 30.0 | 30.56 |
| KRH64866 | Soybean | cytosol | 25.09 | 30.4 |
| CDY00658 | Canola | nucleus | 29.45 | 30.0 |
| Bra001348.1-P | Field mustard | nucleus | 29.09 | 29.57 |
| CDY35995 | Canola | nucleus | 31.09 | 28.17 |
| CDY27987 | Canola | nucleus | 31.09 | 28.08 |
| HORVU3Hr1G010470.4 | Barley | cytosol, nucleus | 23.82 | 21.44 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 15.45 | 7.21 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 14.73 | 6.89 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G080730.1 | EnsemblPlantsGene:HORVU3Hr1G080730 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | PANTHER:PTHR31949 |
| PANTHER:PTHR31949:SF5 | SEG:seg | UniParc:UPI000B469A24 | UniProt:A0A287LWH8 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr3H:+:590235293..590240515
Molecular Weight (calculated)
58453.7 Da
IEP (calculated)
11.666
GRAVY (calculated)
-0.861
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MEELLGTEIG KHDYDWLLTP PGTPRAPAPE VAEKAPPSNV PKRTVTRSSS TARASRLSVH ETENGHSAAP NRPVRSMSRP SNRSSVLTPS ISSVSLRPTT
101: PTKRTSALPS SKPSAPASRP VAARSSTPVK TRPPTPVKTR PSTPVKNCPY GSSSMANSTS VKTTSAQNSR SSTPTSRPRS VSSSSSSTAP SVSRPSSSSG
201: RIPAICRTSS SSSTASETRS SSRSSTPTRQ PVMRPSAPSI ARSPSVGRIS GSNNLTSSGR SAASRGRMSA PSSAPSSRPS SPNTRPRAPV RPLDIPDFPS
301: DTPPNLRTRL PERPLSAGRA RPGIGARSTL NAEPVTSAPV KKISVPAITR NKFSDAPSKT PSLTNGHQNR QTERSVMDSQ PARPSRSATS EENGFGRTIS
401: RKSLDMAIRH MDIRHNLGGI RGTSLFPHSI RSSAPKGRSA RMSDPGHHTS NAEHDAYTDS GSINGHFSGD SIGALSHYGG SSTDSPDRES MGTKETLSEL
501: DMNGSSRYEE MLLREDTKNT DWLHSVDDKS DQSPVFDHRF EPLPEPFGPL
101: PTKRTSALPS SKPSAPASRP VAARSSTPVK TRPPTPVKTR PSTPVKNCPY GSSSMANSTS VKTTSAQNSR SSTPTSRPRS VSSSSSSTAP SVSRPSSSSG
201: RIPAICRTSS SSSTASETRS SSRSSTPTRQ PVMRPSAPSI ARSPSVGRIS GSNNLTSSGR SAASRGRMSA PSSAPSSRPS SPNTRPRAPV RPLDIPDFPS
301: DTPPNLRTRL PERPLSAGRA RPGIGARSTL NAEPVTSAPV KKISVPAITR NKFSDAPSKT PSLTNGHQNR QTERSVMDSQ PARPSRSATS EENGFGRTIS
401: RKSLDMAIRH MDIRHNLGGI RGTSLFPHSI RSSAPKGRSA RMSDPGHHTS NAEHDAYTDS GSINGHFSGD SIGALSHYGG SSTDSPDRES MGTKETLSEL
501: DMNGSSRYEE MLLREDTKNT DWLHSVDDKS DQSPVFDHRF EPLPEPFGPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.