Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35995 | Canola | nucleus | 99.12 | 92.42 |
| AT3G08670.1 | Thale cress | mitochondrion | 72.08 | 71.96 |
| Bra001348.1-P | Field mustard | nucleus | 62.9 | 65.8 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 48.76 | 48.42 |
| PGSC0003DMT400005965 | Potato | nucleus | 46.64 | 46.73 |
| KRH00491 | Soybean | mitochondrion, nucleus | 48.23 | 46.67 |
| Solyc06g054690.2.1 | Tomato | nucleus | 46.47 | 46.63 |
| KRH40665 | Soybean | nucleus | 46.82 | 45.22 |
| KRH09557 | Soybean | mitochondrion | 32.86 | 37.58 |
| KRH64866 | Soybean | cytosol | 29.33 | 36.56 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 37.1 | 36.21 |
| GSMUA_Achr3P09700_001 | Banana | cytosol | 28.98 | 34.31 |
| Zm00001d038489_P001 | Maize | nucleus | 33.39 | 32.7 |
| KXG22223 | Sorghum | nucleus | 33.22 | 32.58 |
| Zm00001d043074_P001 | Maize | cytosol | 31.45 | 32.19 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 30.92 | 31.7 |
| TraesCS3A01G342200.1 | Wheat | nucleus | 30.74 | 31.52 |
| HORVU3Hr1G080730.1 | Barley | nucleus | 30.57 | 31.45 |
| Zm00001d012515_P002 | Maize | nucleus | 30.57 | 31.4 |
| EES01661 | Sorghum | nucleus | 30.74 | 31.3 |
| Zm00001d010620_P001 | Maize | nucleus | 31.8 | 31.2 |
| Os05t0480600-01 | Rice | cytosol | 32.51 | 31.19 |
| TraesCS3B01G374300.1 | Wheat | nucleus | 30.21 | 30.98 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 32.69 | 30.23 |
| Os01t0819000-02 | Rice | nucleus | 30.57 | 29.88 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 31.63 | 28.1 |
| Bra034046.1-P | Field mustard | nucleus | 24.91 | 27.38 |
| Bra029739.1-P | Field mustard | nucleus | 24.03 | 25.71 |
| Bra028894.1-P | Field mustard | nucleus | 22.97 | 25.69 |
| Bra004992.1-P | Field mustard | nucleus | 26.5 | 25.47 |
| Bra000164.1-P | Field mustard | nucleus | 26.86 | 24.96 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 21.02 | 24.24 |
| Bra017135.1-P | Field mustard | nucleus | 11.66 | 17.28 |
| Bra032851.1-P | Field mustard | nucleus | 21.91 | 11.0 |
| Bra010916.1-P | Field mustard | nucleus | 20.49 | 10.78 |
Protein Annotations
| EnsemblPlants:Bra029708.1 | EnsemblPlants:Bra029708.1-P | EnsemblPlantsGene:Bra029708 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 |
| PANTHER:PTHR31949 | PANTHER:PTHR31949:SF2 | SEG:seg | UniParc:UPI0002547D00 | UniProt:M4ELP0 | MapMan:35.2 |
Description
AT3G08670 (E=7e-181) | unknown protein
Coordinates
chrA05:-:22566558..22569391
Molecular Weight (calculated)
60144.7 Da
IEP (calculated)
11.669
GRAVY (calculated)
-0.771
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MNRNLRESLA GGRNTPAISQ FRRGNISQNG FSRDSDENLD LFSKIRRSFP LASSDELPDV SVKLGRLSVG SKPAPRGKGD DLLSSAEGGK NDYDWLLTPP
101: GTPLGNDSHS SLAAPKITPS ARATSASKAS RLSVSQSETS YHSTRPARSS SVTRPSLSTS QYTSFTSNRS PSSILNTSSA SVSSYIRPSS PSSRSSSSAR
201: PSTPTRTSSA SRASTPSRIR PGSSSSSMDK PRPSLSSSRP STPTSRPQIT ANSPNIVASR PNSRPSTPTR RTPSISSASA TSGSNISTGR GGTNCRVTPS
301: LSRPSSPGPR VRTTPQQPIV LADFPLDTPP NLRTSLQGRP ISAGRSRPAA GSSITAKASP EPKGPLTRRN SSPVVTRGRL TETQGKGRYG GGNGLQHHMD
401: APEPRRISNV ADVTSRRTLK TSSTVADSNN GLGRSFSKNS LDMAIRHMDI RNGKSNGCAL STTTLFPQSI RQASSKIQPI RSVNNLSDSI SSSSAENGNE
501: ATDGRRLMGK LSDMDMYESS RYDALLLKED VKNTNWLHSI DDRSSDHGLM FDNGGFELLP EPFGPL
101: GTPLGNDSHS SLAAPKITPS ARATSASKAS RLSVSQSETS YHSTRPARSS SVTRPSLSTS QYTSFTSNRS PSSILNTSSA SVSSYIRPSS PSSRSSSSAR
201: PSTPTRTSSA SRASTPSRIR PGSSSSSMDK PRPSLSSSRP STPTSRPQIT ANSPNIVASR PNSRPSTPTR RTPSISSASA TSGSNISTGR GGTNCRVTPS
301: LSRPSSPGPR VRTTPQQPIV LADFPLDTPP NLRTSLQGRP ISAGRSRPAA GSSITAKASP EPKGPLTRRN SSPVVTRGRL TETQGKGRYG GGNGLQHHMD
401: APEPRRISNV ADVTSRRTLK TSSTVADSNN GLGRSFSKNS LDMAIRHMDI RNGKSNGCAL STTTLFPQSI RQASSKIQPI RSVNNLSDSI SSSSAENGNE
501: ATDGRRLMGK LSDMDMYESS RYDALLLKED VKNTNWLHSI DDRSSDHGLM FDNGGFELLP EPFGPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.