Factsheet for GSMUA_Achr3P09700_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
endoplasmic reticulum 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P25180_001	Banana	cytosol	40.17	33.1
CDX73938	Canola	nucleus	36.4	32.22
CDY00658	Canola	nucleus	36.4	32.22
VIT_08s0056g00640.t01	Wine grape	nucleus	38.28	32.11
Bra001348.1-P	Field mustard	nucleus	35.77	31.61
KRH00491	Soybean	mitochondrion, nucleus	38.08	31.11
KRH09557	Soybean	mitochondrion	31.8	30.71
PGSC0003DMT400005965	Potato	nucleus	35.77	30.27
Solyc06g054690.2.1	Tomato	nucleus	35.56	30.14
AT3G08670.1	Thale cress	mitochondrion	35.36	29.81
KRH40665	Soybean	nucleus	36.4	29.69
Bra029708.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	34.31	28.98
KRH64866	Soybean	cytosol	26.99	28.41
CDY27987	Canola	nucleus	35.15	27.59
CDY35995	Canola	nucleus	34.31	27.02
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	24.69	24.03
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	23.22	21.81
GSMUA_Achr10P...	Banana	nucleus	23.43	19.89
GSMUA_Achr8P02330_001	Banana	cytosol	23.64	18.9
GSMUA_Achr10P...	Banana	mitochondrion	9.21	16.18
GSMUA_Achr5P28870_001	Banana	cytosol	21.97	14.85
GSMUA_Achr2P20960_001	Banana	nucleus	17.36	8.32
GSMUA_Achr6P12380_001	Banana	nucleus	15.9	6.42
GSMUA_Achr3P17040_001	Banana	nucleus	13.6	6.03

Protein Annotations

EnsemblPlants:GSMUA_Achr3P09700_001	EnsemblPlants:GSMUA_Achr3T09700_001	EnsemblPlantsGene:GSMUA_Achr3G09700_001	PANTHER:PTHR31949	PANTHER:PTHR31949:SF2	SEG:seg
UniParc:UPI0002951AFF	UniProt:M0SD87	MapMan:35.2	:	:	:

Description

transposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G09700_001]

Coordinates

chr3:+:7038391..7040842

Molecular Weight (calculated)

51262.3 Da

IEP (calculated)

11.245

GRAVY (calculated)

-0.681

Length

478 amino acids

Sequence
(BLAST)

001: MKSRMDDLLS ADVGKHDYDW LLTPPGTPLF TFSKATDDQK SRANPGCRSN PRSASTDKAS RVSCLCSMLW SIQILHEDFL QIKLNNLPSS TTRSSMSNAY
101: SSSTYLSNNS RTAVLDTSTA SVTSKPTTPA TRSTQSAPSR SPTPVKARPS LPSSMDKPRP SQSFRTAAPT VRPQAPSNTS NSSSSAAATR PSTPIRRAAT
201: TPAAAPAITR SASVGRVPAT NNRKSSPVMR PSSPAPRART VPDIPSEAPP NLRTKVPERA VSAGRQRPGT ALAVRATSNS EAAAAVSAVR RQSSSPVIAR
301: GRLQENSSGN RMGNRVNEVK AADNKKSLAS EPAARRPTKP ASPTENTAGF GRSISKKSMD MALKHMDIRQ SMGGLRGAAL FPQSIRSAAQ KLRPGRSVAA
401: DCNGAAMSNG DLAVRPPNEP FMERECKLDL YESSRCDAIL LKEDSKNMNW LHSTEDKSDQ RPLFDYRFGQ LPEPFGPL

Best Arabidopsis Sequence Match ( AT3G08670.1 )
(BLAST)

001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL

Arabidopsis Description

At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.