CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00491	Soybean	mitochondrion, nucleus	86.69	86.84
VIT_08s0056g00640.t01	Wine grape	nucleus	57.85	59.47
AT3G08670.1	Thale cress	mitochondrion	49.32	50.97
PGSC0003DMT400005965	Potato	nucleus	48.63	50.44
Solyc06g054690.2.1	Tomato	nucleus	47.95	49.82
CDY00658	Canola	nucleus	45.22	49.07
Bra001348.1-P	Field mustard	nucleus	44.88	48.61
CDX73938	Canola	nucleus	44.2	47.96
Bra029708.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	45.22	46.82
KRH09557	Soybean	mitochondrion	38.57	45.66
CDY35995	Canola	nucleus	44.88	43.33
CDY27987	Canola	nucleus	44.71	43.02
KRH64866	Soybean	cytosol	31.91	41.19
GSMUA_Achr6P25180_001	Banana	cytosol	38.23	38.62
GSMUA_Achr3P09700_001	Banana	cytosol	29.69	36.4
KXG22223	Sorghum	nucleus	34.3	34.84
Zm00001d038489_P001	Maize	nucleus	34.3	34.78
Zm00001d043074_P001	Maize	cytosol	32.59	34.54
TraesCS3D01G336100.1	Wheat	nucleus	32.08	34.06
TraesCS3B01G374300.1	Wheat	nucleus	32.08	34.06
TraesCS3A01G342200.1	Wheat	nucleus	32.08	34.06
HORVU3Hr1G080730.1	Barley	nucleus	31.91	34.0
EES01661	Sorghum	nucleus	31.91	33.63
Zm00001d012515_P002	Maize	nucleus	31.57	33.58
Os05t0480600-01	Rice	cytosol	33.79	33.56
TraesCS1A01G302000.1	Wheat	nucleus	34.81	33.33
Zm00001d010620_P001	Maize	nucleus	32.42	32.93
TraesCS1B01G311900.2	Wheat	nucleus	34.81	32.03
Os01t0819000-02	Rice	nucleus	30.2	30.57
KRH00210	Soybean	nucleus	23.89	27.18
KRH49356	Soybean	nucleus	23.55	26.8
KRG97756	Soybean	nucleus	27.13	26.46
KRH31123	Soybean	nucleus	26.11	24.72
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus, plastid	20.31	24.24
KRH14961	Soybean	nucleus	25.26	22.16
KRH73177	Soybean	nucleus	25.43	21.53
KRH42634	Soybean	nucleus	20.82	10.38
KRH31435	Soybean	nucleus	19.28	9.8
KRG97456	Soybean	nucleus	19.28	9.78
KRH58738	Soybean	nucleus	12.8	8.62

Protein Annotations

EMBL:ACUP02006047	EnsemblPlants:KRH40665	EnsemblPlantsGene:GLYMA_09G272800	EntrezGene:100802172	PANTHER:PTHR31949	PANTHER:PTHR31949:SF2
ProteinID:KRH40665	ProteinID:KRH40665.1	SEG:seg	UniParc:UPI0002338E9E	UniProt:I1L6Y1	MapMan:35.2

Description

hypothetical protein

Coordinates

chr9:+:48916244..48920915

Molecular Weight (calculated)

62835.6 Da

IEP (calculated)

11.364

GRAVY (calculated)

-0.840

Length

586 amino acids

Sequence
(BLAST)

001: MMSGRNAREY LLGSLNHHRR GHSFNGVANN NNYRDDNLDL FSNNRRSLSL AASSDDSSDV SVKLGRLSIG TAKPVKSGID DLLSSTEGGK HDYDWLLTPP
101: GTPVFPSEGE SQTTLAPPRR SLTRSTSTSK TSRLAVSQSE NNNPASRPAR SSSVTRSSIS TSHSQYSSYS SNRHSSSILN TSSASVSSYI RPSSPITRSS
201: SSARPSTPSS RPTASRSSTP SKPRPVSTSS TAERNRPSSQ GSRPSTPSSR PHIPANLHSP SASSTRSLSR PSTPTRRSSM PSLSPSPSPT IGSLTSAGRV
301: SSNGRNSAPA SRPSSPSPRV RPPPQPIVPP DFPLETPPNL RTTLPDRPVS AGRSRPGGVT MKTNSSETQA SPVTMPRRHS SPIVSRGRVT EPAAKTRGYS
401: NGHHVDAPEP RKVSHAPEVA ARKSVRSSST APDNTGFGRT ISKKSLDMAI KHMDIRNSSG NIRSLTSTTL FPQSIRTSTT KSHRVSSAPA SVDMNGSMIS
501: SKNGANFDVG NGIDRNMMMK GRDADERHYS AKLSEVDIYE SSRYDALLFK EDLKNTNWLH GADDKCDQGP IFDNGFEHLP EPFGLL

Best Arabidopsis Sequence Match ( AT3G08670.1 )
(BLAST)

001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL

Arabidopsis Description

At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.