Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01661 | Sorghum | nucleus | 66.84 | 69.6 |
| TraesCS3A01G342200.1 | Wheat | nucleus | 64.77 | 67.93 |
| Zm00001d043074_P001 | Maize | cytosol | 64.77 | 67.81 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 64.59 | 67.75 |
| TraesCS3B01G374300.1 | Wheat | nucleus | 64.08 | 67.21 |
| HORVU3Hr1G080730.1 | Barley | nucleus | 63.56 | 66.91 |
| Zm00001d012515_P002 | Maize | nucleus | 62.69 | 65.88 |
| Os05t0480600-01 | Rice | cytosol | 58.2 | 57.12 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 40.07 | 40.0 |
| Solyc06g054690.2.1 | Tomato | nucleus | 31.43 | 32.27 |
| PGSC0003DMT400005965 | Potato | nucleus | 31.43 | 32.21 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 27.12 | 31.98 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 31.43 | 31.93 |
| KRH09557 | Soybean | mitochondrion | 27.29 | 31.92 |
| KRH64866 | Soybean | cytosol | 24.52 | 31.28 |
| KRH00491 | Soybean | mitochondrion, nucleus | 31.09 | 30.77 |
| Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 29.88 | 30.57 |
| AT3G08670.1 | Thale cress | mitochondrion | 29.71 | 30.34 |
| KRH40665 | Soybean | nucleus | 30.57 | 30.2 |
| CDY00658 | Canola | nucleus | 27.29 | 29.26 |
| CDX73938 | Canola | nucleus | 27.12 | 29.07 |
| CDY27987 | Canola | nucleus | 29.71 | 28.24 |
| CDY35995 | Canola | nucleus | 29.53 | 28.17 |
| Bra001348.1-P | Field mustard | nucleus | 25.91 | 27.73 |
| Os01t0141900-01 | Rice | nucleus | 22.63 | 21.62 |
| Os12t0239200-01 | Rice | nucleus | 18.65 | 9.12 |
| Os12t0239000-01 | Rice | nucleus | 16.58 | 8.18 |
Protein Annotations
| EnsemblPlants:Os01t0819000-02 | EnsemblPlantsGene:Os01g0819000 | EntrezGene:4327446 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF5 | ProteinID:BAD73353.1 |
| ProteinID:BAD73559.1 | ProteinID:BAF06550.1 | ProteinID:BAS74951.1 | ProteinID:EEE55587.1 | RefSeq:XP_015622205.1 | RefSeq:XP_015622207.1 |
| SEG:seg | UniParc:UPI000048DF39 | UniProt:Q5QLZ3 | MapMan:35.2 | : | : |
Description
Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0819000-01);Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0819000-02)
Coordinates
chr1:+:34888360..34892652
Molecular Weight (calculated)
61323.3 Da
IEP (calculated)
11.812
GRAVY (calculated)
-0.756
Length
579 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLLDTEIG KHDYDWLLTP PGSPHAPILE VVEKAPSSDV PKRITTRSSS TTRASRLSIP ETENGHSTVP TRPARSNSVS RPSIQSTLIS SNNRSSVVNA
101: SISSVCSPPT TPSKRTSTLS SSKPSVPASR QVPTRPSTPT KTRPCTPVKP RPSTPVKPRP STPNKTRPST PVKTRSSVPN TMSTSTIAKT TSAQNSRPST
201: PTSRPRIMSN SSSSTSSAAS RPSSSSGRTS TISRTSSSTS TVPSVSRSSS RSSTPTRQPI TRSSAPLAGH SPSVGRIFGS NNITSIGRPV TSNGRSSAPS
301: SAPSSRPSSP NSRARAPVRP LDIPDFPSET PPNLRTKLPQ RPLSAGRARP GVGLGPKSAP NAEQVRSAPV KKMTVPAITR SKFPDAPSRV SSLTNGHQSR
401: QSEGSAVEGQ HTKPLRSITG TDNGFGRTIS RKSLDMAIKH MDIRQNLGGI RGASLFPPSI RSAGAKVRSA RMSDPAHLSL NGDCHFTDNG SINGHFSGDS
501: NGTLSNNGGS STGSPDRESI GTKETLSELD LYTTARYEAL LLREDITNTN WLHNVDDKSD QSPVFDHRFE PLPEPFGPL
101: SISSVCSPPT TPSKRTSTLS SSKPSVPASR QVPTRPSTPT KTRPCTPVKP RPSTPVKPRP STPNKTRPST PVKTRSSVPN TMSTSTIAKT TSAQNSRPST
201: PTSRPRIMSN SSSSTSSAAS RPSSSSGRTS TISRTSSSTS TVPSVSRSSS RSSTPTRQPI TRSSAPLAGH SPSVGRIFGS NNITSIGRPV TSNGRSSAPS
301: SAPSSRPSSP NSRARAPVRP LDIPDFPSET PPNLRTKLPQ RPLSAGRARP GVGLGPKSAP NAEQVRSAPV KKMTVPAITR SKFPDAPSRV SSLTNGHQSR
401: QSEGSAVEGQ HTKPLRSITG TDNGFGRTIS RKSLDMAIKH MDIRQNLGGI RGASLFPPSI RSAGAKVRSA RMSDPAHLSL NGDCHFTDNG SINGHFSGDS
501: NGTLSNNGGS STGSPDRESI GTKETLSELD LYTTARYEAL LLREDITNTN WLHNVDDKSD QSPVFDHRFE PLPEPFGPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.