Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol, nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P25180_001 | Banana | cytosol | 46.23 | 39.14 |
| TraesCS3A01G342200.1 | Wheat | nucleus | 32.79 | 29.17 |
| TraesCS3B01G374300.1 | Wheat | nucleus | 32.79 | 29.17 |
| KXG22223 | Sorghum | nucleus | 34.22 | 29.12 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 32.59 | 28.99 |
| EES01661 | Sorghum | nucleus | 32.38 | 28.6 |
| HORVU3Hr1G080730.1 | Barley | nucleus | 31.77 | 28.36 |
| Zm00001d010620_P001 | Maize | nucleus | 33.2 | 28.25 |
| Zm00001d043074_P001 | Maize | cytosol | 31.36 | 27.85 |
| Zm00001d012515_P002 | Maize | nucleus | 30.75 | 27.4 |
| Zm00001d038489_P001 | Maize | nucleus | 31.98 | 27.16 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 33.81 | 27.12 |
| Os05t0480600-01 | Rice | cytosol | 32.59 | 27.12 |
| Os01t0819000-02 | Rice | nucleus | 31.98 | 27.12 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 33.6 | 25.9 |
| GSMUA_Achr3P09700_001 | Banana | cytosol | 24.03 | 24.69 |
| CDY00658 | Canola | nucleus | 24.85 | 22.59 |
| KRH00491 | Soybean | mitochondrion, nucleus | 26.27 | 22.05 |
| CDX73938 | Canola | nucleus | 24.24 | 22.04 |
| PGSC0003DMT400005965 | Potato | nucleus | 25.05 | 21.77 |
| Bra001348.1-P | Field mustard | nucleus | 23.83 | 21.63 |
| Solyc06g054690.2.1 | Tomato | nucleus | 24.64 | 21.45 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 24.85 | 21.4 |
| Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 24.24 | 21.02 |
| KRH09557 | Soybean | mitochondrion | 21.18 | 21.01 |
| AT3G08670.1 | Thale cress | mitochondrion | 24.24 | 20.99 |
| KRH64866 | Soybean | cytosol | 19.35 | 20.93 |
| KRH40665 | Soybean | nucleus | 24.24 | 20.31 |
| CDY35995 | Canola | nucleus | 23.83 | 19.28 |
| CDY27987 | Canola | nucleus | 23.83 | 19.21 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 16.09 | 15.52 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 17.72 | 14.55 |
| GSMUA_Achr10P... | Banana | nucleus | 16.29 | 14.21 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 17.31 | 12.02 |
| GSMUA_Achr10P... | Banana | mitochondrion | 4.68 | 8.46 |
| GSMUA_Achr2P20960_001 | Banana | nucleus | 12.02 | 5.92 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 11.2 | 4.65 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 8.96 | 4.08 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP06730_001 | EnsemblPlants:GSMUA_AchrUn_randomT06730_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG06730_001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF2 | PFscan:PS51257 |
| SEG:seg | UniParc:UPI0002962A9E | UniProt:M0U6Y4 | MapMan:35.2 | : | : |
Description
transposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG06730_001]
Coordinates
chrchrUn_random:-:28027416..28029552
Molecular Weight (calculated)
52424.4 Da
IEP (calculated)
10.890
GRAVY (calculated)
-0.574
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLPRRMLSA SQTENGHSAR PARSSSVTHA SLSSCYISDH NKTLVLNTNS ISVTSIPSTP IKRPVTPSTA KTLIPVSYPL QTRSFTLVKT RSTSGPPCIK
101: PEPSHNSRPA TPTSRSQFST SANSNSSLVA AHSISRPSTA TCLPISRATT SASTVQRSPS VGRLSASNGR IPHSASSSCP SSPNRQPQVP KGSAAFSSRP
201: VSSWSRAPVS SPSFSRPSSP RPRAPVQPID LPDFPIDVPP NLRTNLPERS LSASRARPGM ALAVRANSNS EAVVPSSSKR KISVPFESRS KFPENTPKAP
301: LHSNTLHSNS PEDQKPMGSE AGPCRTAKLA SATESTGFGR TISKSSLDMA IKHMDIRQKS FGGIRGASVF PHSIQSMMSS GRTVGASKTT VPVTNDGILV
401: ENGGHKETSG AFNGAVSCNM NTGSRSSDWE NLMTRERMDD ADLHGSHKYD VILMKEDLKN TSWLLGADDK SDQGSVFDHR FEPPPELFDP L
101: PEPSHNSRPA TPTSRSQFST SANSNSSLVA AHSISRPSTA TCLPISRATT SASTVQRSPS VGRLSASNGR IPHSASSSCP SSPNRQPQVP KGSAAFSSRP
201: VSSWSRAPVS SPSFSRPSSP RPRAPVQPID LPDFPIDVPP NLRTNLPERS LSASRARPGM ALAVRANSNS EAVVPSSSKR KISVPFESRS KFPENTPKAP
301: LHSNTLHSNS PEDQKPMGSE AGPCRTAKLA SATESTGFGR TISKSSLDMA IKHMDIRQKS FGGIRGASVF PHSIQSMMSS GRTVGASKTT VPVTNDGILV
401: ENGGHKETSG AFNGAVSCNM NTGSRSSDWE NLMTRERMDD ADLHGSHKYD VILMKEDLKN TSWLLGADDK SDQGSVFDHR FEPPPELFDP L
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.