Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22223 | Sorghum | nucleus | 71.53 | 73.14 |
| Zm00001d038489_P001 | Maize | nucleus | 67.46 | 68.86 |
| Zm00001d010620_P001 | Maize | nucleus | 65.08 | 66.55 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 67.8 | 65.36 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 65.25 | 60.44 |
| Os01t0819000-02 | Rice | nucleus | 57.12 | 58.2 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 42.2 | 42.93 |
| Solyc06g054690.2.1 | Tomato | nucleus | 32.54 | 34.04 |
| KRH00491 | Soybean | mitochondrion, nucleus | 33.73 | 34.02 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 32.71 | 33.86 |
| PGSC0003DMT400005965 | Potato | nucleus | 32.37 | 33.81 |
| KRH40665 | Soybean | nucleus | 33.56 | 33.79 |
| AT3G08670.1 | Thale cress | mitochondrion | 32.37 | 33.69 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 27.12 | 32.59 |
| Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 31.19 | 32.51 |
| CDX73938 | Canola | nucleus | 29.15 | 31.85 |
| Bra001348.1-P | Field mustard | nucleus | 29.15 | 31.79 |
| CDY00658 | Canola | nucleus | 28.98 | 31.67 |
| KRH09557 | Soybean | mitochondrion | 26.1 | 31.11 |
| CDY35995 | Canola | nucleus | 30.85 | 29.98 |
| CDY27987 | Canola | nucleus | 30.68 | 29.72 |
| KRH64866 | Soybean | cytosol | 22.71 | 29.52 |
| Os01t0141900-01 | Rice | nucleus | 22.37 | 21.78 |
| Os12t0239200-01 | Rice | nucleus | 16.1 | 8.02 |
| Os12t0239000-01 | Rice | nucleus | 15.25 | 7.67 |
Protein Annotations
| EMBL:AK102461 | EnsemblPlants:Os05t0480600-01 | EnsemblPlantsGene:Os05g0480600 | EntrezGene:4339121 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF5 |
| ProteinID:AAT01378.1 | ProteinID:AAW56864.1 | ProteinID:BAF17770.1 | ProteinID:BAS94573.1 | ProteinID:EEE64113.1 | RefSeq:XP_015640265.1 |
| RefSeq:XP_015640266.1 | SEG:seg | UniParc:UPI000035ACF8 | UniProt:Q75GL8 | MapMan:35.2 | : |
Description
Similar to transposon protein CACTA, En/Spm sub-class. (Os05t0480600-01)
Coordinates
chr5:-:23622731..23627034
Molecular Weight (calculated)
62001.9 Da
IEP (calculated)
12.137
GRAVY (calculated)
-0.795
Length
590 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLLGAEVG KNDYDWLLTP PGTPRCPVLE VAEKTPSPNI LPKRTATRSS STTRASRLSV SQTENGHSTA PTRPARSNSV TRPSIQSTLM SSSNRTAVLN
101: TSISSVSSRP TTPSRRSSTV VAPKQSIAAS RPVPARSSTP VKTRPSTPTK TRPSTPVRTR QTANSTSDSA AARTTSAQNS RPSTPTSRSR AMPNSSSGAI
201: PAMSRPGAST ISATSRSNAS TISATSRPGS SSSNVPGISR ATSLSSSTVP SMSRSSSRSS TPTRQPAMRS SAPAVGRSPS VGRSSSISSL TSSINRPAAN
301: GGRNSAPSSA PSSRPSSPGP RPRAPVRPLD IPDFPNETPP NLRTKLPERP LSAGRSRPGM ALGVRSTSNT EPSAASAPVK KVSVPAMSRS KFSDAPSRTP
401: TLTNGRQNRQ SERSTVDSQP SKVSRPATGT DNGFGMTMSK KSLDMAIRHM DIRQNLGGIR GASLFPHSIR STAGKGRPAR MSDPGHTISN GDHRHYADNG
501: STNGHFSGDS NGALSRNGGS STDSPDRGSI GGKETLSELD MYGSSRYEAM LLREDVRNTS WLHGFDDSKP DQSPLFDHRF EPLPEPFSPL
101: TSISSVSSRP TTPSRRSSTV VAPKQSIAAS RPVPARSSTP VKTRPSTPTK TRPSTPVRTR QTANSTSDSA AARTTSAQNS RPSTPTSRSR AMPNSSSGAI
201: PAMSRPGAST ISATSRSNAS TISATSRPGS SSSNVPGISR ATSLSSSTVP SMSRSSSRSS TPTRQPAMRS SAPAVGRSPS VGRSSSISSL TSSINRPAAN
301: GGRNSAPSSA PSSRPSSPGP RPRAPVRPLD IPDFPNETPP NLRTKLPERP LSAGRSRPGM ALGVRSTSNT EPSAASAPVK KVSVPAMSRS KFSDAPSRTP
401: TLTNGRQNRQ SERSTVDSQP SKVSRPATGT DNGFGMTMSK KSLDMAIRHM DIRQNLGGIR GASLFPHSIR STAGKGRPAR MSDPGHTISN GDHRHYADNG
501: STNGHFSGDS NGALSRNGGS STDSPDRGSI GGKETLSELD MYGSSRYEAM LLREDVRNTS WLHGFDDSKP DQSPLFDHRF EPLPEPFSPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.