Factsheet for Os01t0141900-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02509	Sorghum	nucleus	86.96	87.83
Zm00001d039901_P003	Maize	nucleus	85.31	86.17
HORVU3Hr1G010470.4	Barley	cytosol, nucleus	79.21	78.56
TraesCS3D01G054400.1	Wheat	cytosol	76.24	73.22
TraesCS3B01G067400.1	Wheat	nucleus	76.24	73.1
TraesCS3A01G055100.2	Wheat	cytosol	71.78	63.32
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	49.84	59.33
PGSC0003DMT400069903	Potato	cytosol, nucleus, plastid	15.35	58.12
VIT_13s0067g00570.t01	Wine grape	nucleus	51.49	57.25
GSMUA_Achr8P02330_001	Banana	cytosol	55.12	55.85
PGSC0003DMT400059907	Potato	plastid	15.84	54.86
VIT_08s0007g02160.t01	Wine grape	nucleus	49.01	54.2
GSMUA_Achr10P...	Banana	nucleus	49.17	52.93
KRG97756	Soybean	nucleus	51.82	52.25
Bra004992.1-P	Field mustard	nucleus	50.16	51.61
AT2G40070.1	Thale cress	nucleus	51.32	51.24
CDX74811	Canola	nucleus	49.51	51.02
Solyc03g096090.2.1	Tomato	plastid	40.43	50.41
Bra000164.1-P	Field mustard	nucleus	50.66	50.41
CDY60338	Canola	nucleus	50.49	50.16
CDY07628	Canola	nucleus	50.33	50.08
KRH00210	Soybean	nucleus	42.41	49.9
CDY20509	Canola	cytosol	49.17	49.58
KRH31123	Soybean	nucleus	50.49	49.43
KRH49356	Soybean	nucleus	41.91	49.32
AT3G09000.1	Thale cress	nucleus	40.26	45.1
Bra034046.1-P	Field mustard	nucleus	37.62	44.27
CDY53090	Canola	nucleus	37.13	44.12
KRH14961	Soybean	nucleus	48.35	43.86
PGSC0003DMT400021880	Potato	nucleus	38.61	43.74
Bra029739.1-P	Field mustard	nucleus	38.12	43.67
CDY44674	Canola	nucleus	37.95	43.48
CDY22176	Canola	nucleus	36.96	43.41
Solyc09g014490.2.1	Tomato	nucleus	37.46	42.43
PGSC0003DMT400031154	Potato	nucleus	29.04	42.0
KRH73177	Soybean	nucleus	47.69	41.76
PGSC0003DMT400031157	Potato	nucleus	10.56	41.29
GSMUA_Achr5P28870_001	Banana	cytosol	46.2	39.6
AT5G01280.1	Thale cress	mitochondrion, nucleus	31.35	39.26
CDY55901	Canola	nucleus	32.67	39.13
Bra028894.1-P	Field mustard	nucleus	32.67	39.13
CDY48118	Canola	nucleus	32.67	39.13
AT2G38160.3	Thale cress	nucleus	20.63	39.06
PGSC0003DMT400069902	Potato	cytosol	10.23	38.99
CDX93325	Canola	nucleus	18.15	33.13
Bra017135.1-P	Field mustard	nucleus	17.16	27.23
CDY18403	Canola	nucleus	17.0	26.96
Os01t0819000-02	Rice	nucleus	21.62	22.63
Os05t0480600-01	Rice	cytosol	21.78	22.37
Os12t0239000-01	Rice	nucleus	19.31	9.97
Os12t0239200-01	Rice	nucleus	18.65	9.54

Protein Annotations

EMBL:AK070848	EnsemblPlants:Os01t0141900-01	EnsemblPlantsGene:Os01g0141900	EntrezGene:4325484	PANTHER:PTHR31949	PANTHER:PTHR31949:SF1
ProteinID:BAF03901.1	ProteinID:BAS70325.1	RefSeq:XP_015613095.1	SEG:seg	UniParc:UPI0000DD8964	UniProt:Q0JQS7
MapMan:35.2	:	:	:	:	:

Description

Conserved hypothetical protein. (Os01t0141900-01)

Coordinates

chr1:+:2261501..2266230

Molecular Weight (calculated)

63526.2 Da

IEP (calculated)

12.047

GRAVY (calculated)

-0.802

Length

606 amino acids

Sequence
(BLAST)

001: MHRVAMAAAA AGDGGDGRGR TLGAVIKEKD EELALFLEMR RREKERGAAA AAAAAEQLLL SGDRVDVARD GMLLVDQPPP RPQPPAEHKA AAYRMTGGFR
101: RAPGGADDFL NSDGGDKNDY DWLLTPPGTP LFPSLEESKK SPVSQTGTPK TRPTALKSRL ANHPDPPSRT TLPLRATSSN NLNSAATTRR PSSSGGHTSN
201: SSRPSTPTGR PALTNTSKGS RPSTPTSRAT VPSKSGPPAP RSSTPTSRST LTSARSTTPS RTSGPATRTS IPSGRASAPA SRSSTPTSRS SIPATRSSTP
301: SSRPSIPAQS KPVSRSSTPT RRPSATSTQH GSLAAPVRST SISKPAPTMS KSSSPAKTIA STPSRGSSPT VKSRPWKPSE MPGFSLDAPP NLRTSLPERP
401: TSATRGRPGA PSSRSSSVEP GPAARPRRQS CSPSRGRTLN GSVPSGSSVP AVRRSHLNSG DSVNPVQMGN KMVERVVNMR RLVPPKHDDQ RSSLNGLSGK
501: SSNSPDSSGF GRTLSKKSLD MALRHMDIRR SIPNNLRPLM TSIPASSVHS ARSGSTRSRP ISVSDSPLAT SSNASSEPSV NNNLMCLDSI EIDDELCSDR
601: AGQYRR

Best Arabidopsis Sequence Match ( AT2G40070.1 )
(BLAST)

001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR

Arabidopsis Description

At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.