Factsheet for PGSC0003DMT400031154

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031157	Potato	nucleus	32.22	87.1
PGSC0003DMT400069902	Potato	cytosol	20.29	53.46
Solyc03g096090.2.1	Tomato	plastid	56.56	48.77
VIT_13s0067g00570.t01	Wine grape	nucleus	48.69	37.43
KRG97756	Soybean	nucleus	47.97	33.44
KRH31123	Soybean	nucleus	49.16	33.28
Bra004992.1-P	Field mustard	nucleus	45.58	32.43
CDX74811	Canola	nucleus	45.35	32.31
CDY07628	Canola	nucleus	45.82	31.53
Bra000164.1-P	Field mustard	nucleus	45.58	31.36
CDY20509	Canola	cytosol	44.87	31.28
CDY60338	Canola	nucleus	45.35	31.15
AT2G40070.1	Thale cress	nucleus	45.11	31.14
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	37.23	30.65
GSMUA_Achr8P02330_001	Banana	cytosol	42.96	30.1
Zm00001d039901_P003	Maize	nucleus	42.48	29.67
EES02509	Sorghum	nucleus	41.77	29.17
Os01t0141900-01	Rice	nucleus	42.0	29.04
GSMUA_Achr10P...	Banana	nucleus	38.66	28.77
KRH14961	Soybean	nucleus	43.68	27.4
KRH73177	Soybean	nucleus	44.63	27.02
HORVU3Hr1G010470.4	Barley	cytosol, nucleus	38.19	26.19
TraesCS3B01G067400.1	Wheat	nucleus	38.66	25.63
TraesCS3D01G054400.1	Wheat	cytosol	38.19	25.36
PGSC0003DMT400021880	Potato	nucleus	31.74	24.86
GSMUA_Achr5P28870_001	Banana	cytosol	39.62	23.48
TraesCS3A01G055100.2	Wheat	cytosol	38.42	23.44
PGSC0003DMT400005965	Potato	nucleus	28.4	21.06
PGSC0003DMT400045033	Potato	nucleus	21.96	8.11
PGSC0003DMT400059907	Potato	plastid	2.86	6.86
PGSC0003DMT400069903	Potato	cytosol, nucleus, plastid	1.43	3.75

Protein Annotations

EnsemblPlants:PGSC0003DMT400031154	EnsemblPlantsGene:PGSC0003DMG401011931	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR31949
PANTHER:PTHR31949:SF1	PGSC:PGSC0003DMG401011931	SEG:seg	TMHMM:TMhelix	UniParc:UPI000295E1A2	UniProt:M1AV91
MapMan:35.2	:	:	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG401011931]

Coordinates

chr3:-:35121231..35126947

Molecular Weight (calculated)

44926.7 Da

IEP (calculated)

12.230

GRAVY (calculated)

-0.568

Length

419 amino acids

Sequence
(BLAST)

001: MNRSFRAEES LTGPGQRQRQ PLMGSIRSSD EELSLFLEMR RRENDRNNNR FLQKSDEFDP LGSKSGSSPA FDIASAAPMR RTRTDEFLNA DNDKTDYDWL
101: LTPPGTPLFP SLEMESRKTM MSQLGTSRAH PTALTSRLTN SLPEATSRSN LASRQPASSP GLNTSSSSLR RPSSSGGSRP STPTGRPTLS SSRSTSTSAS
201: RSTSATATKA MTSTATSRSM STATACRSSR SATPTSRATM PASKPTVPPR SSTPTARSSA RSSTPTSRAS VTGSKSTSRA ATPTRRATSV SGTTNTTVPP
301: VKPVSFPSGT RSATMASRNP AASRASSPTV KPRPWKPSDI PGFSLDAPPN LRTSLPDRPI SATRGRPGAA SVRSSSVEPA SNVLFLLLLL SLIILLSIFF
401: FFQYFHNSIL LLHFFQTMF

Best Arabidopsis Sequence Match ( AT2G40070.1 )
(BLAST)

001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR

Arabidopsis Description

At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.