Factsheet for HORVU3Hr1G010470.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G054400.1	Wheat	cytosol	87.4	84.63
TraesCS3B01G067400.1	Wheat	nucleus	87.07	84.18
EES02509	Sorghum	nucleus	79.05	80.5
Os01t0141900-01	Rice	nucleus	78.56	79.21
Zm00001d039901_P003	Maize	nucleus	77.09	78.5
TraesCS3A01G055100.2	Wheat	cytosol	80.69	71.76
PGSC0003DMT400069903	Potato	cytosol, nucleus, plastid	14.57	55.62
PGSC0003DMT400059907	Potato	plastid	15.88	55.43
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	45.34	54.42
VIT_13s0067g00570.t01	Wine grape	nucleus	46.32	51.93
GSMUA_Achr8P02330_001	Banana	cytosol	50.57	51.67
VIT_08s0007g02160.t01	Wine grape	nucleus	45.99	51.28
GSMUA_Achr10P...	Banana	nucleus	46.81	50.8
Bra004992.1-P	Field mustard	nucleus	46.64	48.39
CDX74811	Canola	nucleus	46.15	47.96
Bra000164.1-P	Field mustard	nucleus	47.79	47.95
KRG97756	Soybean	nucleus	47.14	47.92
CDY60338	Canola	nucleus	47.79	47.87
CDY07628	Canola	nucleus	47.63	47.78
KRH00210	Soybean	nucleus	40.1	47.57
Solyc03g096090.2.1	Tomato	plastid	37.64	47.33
AT2G40070.1	Thale cress	nucleus	46.81	47.12
CDY20509	Canola	cytosol	46.32	47.09
KRH49356	Soybean	nucleus	39.44	46.8
KRH31123	Soybean	nucleus	45.99	45.4
CDY53090	Canola	nucleus	35.52	42.55
KRH14961	Soybean	nucleus	46.48	42.52
Bra034046.1-P	Field mustard	nucleus	35.35	41.94
Bra029739.1-P	Field mustard	nucleus	35.84	41.4
CDY22176	Canola	nucleus	34.86	41.28
AT3G09000.1	Thale cress	nucleus	36.5	41.22
CDY44674	Canola	nucleus	35.68	41.21
PGSC0003DMT400021880	Potato	nucleus	36.01	41.12
KRH73177	Soybean	nucleus	44.84	39.6
Solyc09g014490.2.1	Tomato	nucleus	34.53	39.44
AT5G01280.1	Thale cress	mitochondrion, nucleus	30.28	38.22
PGSC0003DMT400031154	Potato	nucleus	26.19	38.19
GSMUA_Achr5P28870_001	Banana	cytosol	43.7	37.77
Bra028894.1-P	Field mustard	nucleus	30.61	36.96
CDY55901	Canola	nucleus	30.61	36.96
CDY48118	Canola	nucleus	30.44	36.76
AT2G38160.3	Thale cress	nucleus	18.66	35.62
PGSC0003DMT400031157	Potato	nucleus	8.51	33.55
PGSC0003DMT400069902	Potato	cytosol	8.67	33.33
CDX93325	Canola	nucleus	17.35	31.93
Bra017135.1-P	Field mustard	nucleus	16.2	25.92
CDY18403	Canola	nucleus	15.88	25.39
HORVU3Hr1G080730.1	Barley	nucleus	21.44	23.82
HORVU5Hr1G030640.2	Barley	nucleus	17.84	9.25
HORVU5Hr1G030630.1	Barley	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	15.55	8.09

Protein Annotations

EnsemblPlants:HORVU3Hr1G010470.4	EnsemblPlantsGene:HORVU3Hr1G010470	PANTHER:PTHR31949	PANTHER:PTHR31949:SF1	SEG:seg	UniParc:UPI000B46BA75
UniProt:A0A287K332	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:23094856..23099560

Molecular Weight (calculated)

63774.3 Da

IEP (calculated)

12.112

GRAVY (calculated)

-0.783

Length

611 amino acids

Sequence
(BLAST)

001: GAVIREKDEE LALFLEMRRR DKERAAADTL LLAGDADDGL LLLDPPPPPP PPVPVPAEPR AAPAPAYRMA GGFRRAPGGA DDFLHSDAGD KTDYDWLLTP
101: PGTPLFPSHE AAPKRSPVSQ TGSPKTRQNS LKSRLANHLD PPSRTTHPLR TTSSNSLNSA ATTRRPTSSG GLTSNSSRPS TPTGRAASTT ASKGSRPSSP
201: NARATLPAKT GPTAPRSSTP TSRSTLPSTR SALPSTRSTL PSTRSAVPSS RSTTPSRTSG PATATATATR TSVPSGRASA PASRSSTPTS RSSMPAARST
301: TPLSRPSLPA QSKPASRSST PTRRSSAPPT HTQHSNLPGP VRSSSISRPG PTMSKSSASA ATTTAPAPSR GSSPTVKSRP WKPSEMPGFS LDAPPNLRTS
401: LPERPTSATR GRPGAPSSRS SSVEPGPAAR PKRQSCSPSR GRTSNGSVPS GSSMPAVRRS HLNGGDSVNP VQMGNKMVER VVNMRRLVPP KHDDQRSSLN
501: SLSGKSLNSP DSSGFGRSLS KKSLDMALRH MDIRRSIPNN LRPLMTSIPA SSVHSGRSGS TRGRPISVSD SPLATSSNAS SEPSVNNNLM CFDSIDIDEE
601: LCSDRAGHYA R

Best Arabidopsis Sequence Match ( AT2G40070.1 )
(BLAST)

001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR

Arabidopsis Description

At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.