CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14961	Soybean	nucleus	69.94	72.46
PGSC0003DMT400059907	Potato	plastid	16.04	63.43
PGSC0003DMT400069903	Potato	cytosol, nucleus, plastid	14.6	63.12
VIT_13s0067g00570.t01	Wine grape	nucleus	48.84	62.02
KRG97756	Soybean	nucleus	52.46	60.4
KRH31123	Soybean	nucleus	50.87	56.87
Solyc03g096090.2.1	Tomato	plastid	37.72	53.7
CDY07628	Canola	nucleus	47.11	53.53
Bra000164.1-P	Field mustard	nucleus	46.97	53.37
AT2G40070.1	Thale cress	nucleus	46.68	53.21
CDY60338	Canola	nucleus	46.68	52.95
Bra004992.1-P	Field mustard	nucleus	44.94	52.8
CDX74811	Canola	nucleus	44.51	52.38
CDY20509	Canola	cytosol	45.38	52.25
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	37.14	50.49
KRH00210	Soybean	nucleus	37.14	49.9
KRH49356	Soybean	nucleus	36.13	48.54
GSMUA_Achr10P...	Banana	nucleus	39.16	48.13
EES02509	Sorghum	nucleus	41.62	48.0
Os01t0141900-01	Rice	nucleus	41.76	47.69
Zm00001d039901_P003	Maize	nucleus	41.19	47.5
GSMUA_Achr8P02330_001	Banana	cytosol	40.9	47.32
PGSC0003DMT400069902	Potato	cytosol	10.4	45.28
HORVU3Hr1G010470.4	Barley	cytosol, nucleus	39.6	44.84
PGSC0003DMT400031154	Potato	nucleus	27.02	44.63
PGSC0003DMT400031157	Potato	nucleus	9.97	44.52
TraesCS3D01G054400.1	Wheat	cytosol	40.17	44.06
TraesCS3B01G067400.1	Wheat	nucleus	40.03	43.83
TraesCS3A01G055100.2	Wheat	cytosol	40.9	41.19
GSMUA_Achr5P28870_001	Banana	cytosol	34.25	33.52
KRH40665	Soybean	nucleus	21.53	25.43
KRH00491	Soybean	mitochondrion, nucleus	21.39	25.3
KRH09557	Soybean	mitochondrion	17.49	24.44
KRH64866	Soybean	cytosol	15.17	23.13
KRH31435	Soybean	nucleus	19.08	11.45
KRG97456	Soybean	nucleus	17.34	10.38
KRH42634	Soybean	nucleus	17.2	10.13
KRH58738	Soybean	nucleus	10.84	8.62

Protein Annotations

EMBL:ACUP02001269	EnsemblPlants:KRH73177	EnsemblPlantsGene:GLYMA_02G256600	EntrezGene:100779859	PANTHER:PTHR31949	PANTHER:PTHR31949:SF1
ProteinID:KRH73177	ProteinID:KRH73177.1	SEG:seg	UniParc:UPI00023BC9A4	UniProt:I1JI80	MapMan:35.2

Description

hypothetical protein

Coordinates

chr2:-:44302025..44307689

Molecular Weight (calculated)

72746.7 Da

IEP (calculated)

12.060

GRAVY (calculated)

-0.755

Length

692 amino acids

Sequence
(BLAST)

001: MNRSFRAPES QMQDAFKQRQ HQLGTLRSSS PRVMDRDDEL ALFLEMRNRE KERNDLLRRA AEDFDAAAPL GSNPGNSTLF NVPSAAPAQA RKTGADDFLN
101: SENDKNDYDW LLTPPGTPLF PSLEMETSKT VMSQLGAPTV RPTPLKARFA NSPSEHAGRS NLVSKQPASS PGLTSSGGGI RRPSSAGNLS ELTGRSNSVI
201: KQPASSPGWT SSGGGIRRPS SSGNLSEHSG RSNLVSKQSA SSPGLTSSGG ITRRHSSSGN IGSRSATPAR RSTLTTVSKS SRPSTATTVS KSCRPSTPTT
301: VSKSSRPSTP TTVSKSSRPS TPTSRTTTAS TRTTVASTQT SGSSAKPMVS APKTAVSVTK TTTVSAAKTT ITSRSSTPLS RSTARSSTPT AKPTLPASRP
401: TTRASTPARQ PSTPSNVPTV SSPSVKTSSV SKSAPVMSRQ PVPSRGTSPT VKSRSWKPSE MPGFSLDAPP NLRTSLPERP LSTTRGRPGA SNPRSSSVEP
501: TSSGRPRRQS CSPSRGCSNN GISRSTGSSM PAVNRAYSKA NDNVSPVVMG TKMVERVINM RKLAPPRMDD KNSFHNLSGK SSSSPDSSGF GRSLSKKSLD
601: MAIRHMDIRR RAPGNLRPSL MTKIPASSMY SVRSGPQRSR TASISGSPHA SGSNASSEVS VNENGLCIDN SEIDDDIVSV RSGQSSATVQ GR

Best Arabidopsis Sequence Match ( AT2G40070.1 )
(BLAST)

001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR

Arabidopsis Description

At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.