Factsheet for PGSC0003DMT400059907

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069903	Potato	cytosol, nucleus, plastid	68.0	74.38
VIT_13s0067g00570.t01	Wine grape	nucleus	68.0	21.83
CDX74811	Canola	nucleus	63.43	18.88
KRG97756	Soybean	nucleus	64.57	18.8
AT2G40070.1	Thale cress	nucleus	65.14	18.78
Bra004992.1-P	Field mustard	nucleus	62.86	18.68
CDY20509	Canola	cytosol	63.43	18.47
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	53.14	18.27
Bra000164.1-P	Field mustard	nucleus	62.29	17.9
CDY07628	Canola	nucleus	62.29	17.9
CDY60338	Canola	nucleus	62.29	17.87
KRH31123	Soybean	nucleus	62.86	17.77
GSMUA_Achr10P...	Banana	nucleus	55.43	17.23
KRH14961	Soybean	nucleus	63.43	16.62
GSMUA_Achr8P02330_001	Banana	cytosol	56.57	16.56
KRH73177	Soybean	nucleus	63.43	16.04
EES02509	Sorghum	nucleus	54.86	16.0
HORVU3Hr1G010470.4	Barley	cytosol, nucleus	55.43	15.88
Os01t0141900-01	Rice	nucleus	54.86	15.84
Zm00001d039901_P003	Maize	nucleus	53.14	15.5
PGSC0003DMT400021880	Potato	nucleus	46.86	15.33
TraesCS3D01G054400.1	Wheat	cytosol	54.29	15.06
TraesCS3B01G067400.1	Wheat	nucleus	54.29	15.03
TraesCS3A01G055100.2	Wheat	cytosol	54.86	13.97
GSMUA_Achr5P28870_001	Banana	cytosol	43.43	10.75
PGSC0003DMT400005965	Potato	nucleus	24.0	7.43
PGSC0003DMT400031154	Potato	nucleus	6.86	2.86
PGSC0003DMT400045033	Potato	nucleus	15.43	2.38
PGSC0003DMT400031157	Potato	nucleus	0.57	0.65
PGSC0003DMT400069902	Potato	cytosol	0.57	0.63

Protein Annotations

EnsemblPlants:PGSC0003DMT400059907	EnsemblPlantsGene:PGSC0003DMG401023302	EntrezGene:102588142	PANTHER:PTHR31949	PANTHER:PTHR31949:SF1	PGSC:PGSC0003DMG401023302
RefSeq:XP_006367372.1	SEG:seg	UniParc:UPI000296F87E	UniProt:M1C4W4	MapMan:35.2	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG401023302]

Coordinates

chr3:-:34935824..34936791

Molecular Weight (calculated)

18733.2 Da

IEP (calculated)

11.084

GRAVY (calculated)

-0.641

Length

175 amino acids

Sequence
(BLAST)

001: MHSSGSSVPV PSMSRLHAKA KDNVSPGMVG TKMVERVINM RKLVPPKQDD KHSPHSNLSA KSSSPDSSGF GRSLSKKSLD MAIRHMDIRQ RVPGNLRPLM
101: TNIPASSMYS VRSGPPTRGR TSRSINMPDS PLATSSNASS EVSVSNNVVW VDGSEIDEDI SSDKGARSPA SVHGR

Best Arabidopsis Sequence Match ( AT2G40070.3 )
(BLAST)

001: MESHRTMMSQ TGDSKSRPAT LTSRLANSST ESAARNHLTS RQQTSSPGLS SSSGASRRPS SSGGPGSRPA TPTGRSSTLT ANSKSSRPST PTSRATVSSA
101: TRPSLTNSRS TVSATTKPTP MSRSTSLSSS RLTPTASKPT TSTARSAGSV TRSTPSTTTK SAGPSRSTTP LSRSTARSST PTSRPTLPPS KTISRSSTPT
201: RRPIASASAA TTTANPTISQ IKPSSPAPAK PMPTPSKNPA LSRAASPTVR SRPWKPSDMP GFSLETPPNL RTTLPERPLS ATRGRPGAPS SRSGSVEPGG
301: PPGGRPRRQS CSPSRGRAPM YSSGSSVPAV NRGYSKASDN VSPVMMGTKM VERVINMRKL APPRSDDKGS PHGNLSAKSS SPDSAGFGRT LSKKSLDMAI
401: RHMDIRRTIP GNLRPLMTNI PASSMYSVRS GHTRGRPMNV SDSSPLATSS NASSEISVCN NNGICLEASE KEDDAGSERG CRSPASLQGR

Arabidopsis Description

At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.