Factsheet for PGSC0003DMT400031157

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069902	Potato	cytosol	52.26	50.94
PGSC0003DMT400031154	Potato	nucleus	87.1	32.22
VIT_13s0067g00570.t01	Wine grape	nucleus	58.06	16.51
CDX74811	Canola	nucleus	52.9	13.95
Bra004992.1-P	Field mustard	nucleus	52.9	13.92
KRG97756	Soybean	nucleus	52.9	13.64
KRH31123	Soybean	nucleus	52.26	13.09
AT2G40070.1	Thale cress	nucleus	50.32	12.85
CDY20509	Canola	cytosol	49.68	12.81
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	40.65	12.38
Bra000164.1-P	Field mustard	nucleus	48.39	12.32
CDY07628	Canola	nucleus	48.39	12.32
CDY60338	Canola	nucleus	48.39	12.3
GSMUA_Achr8P02330_001	Banana	cytosol	43.87	11.37
Os01t0141900-01	Rice	nucleus	41.29	10.56
Zm00001d039901_P003	Maize	nucleus	40.65	10.5
EES02509	Sorghum	nucleus	40.65	10.5
KRH14961	Soybean	nucleus	44.52	10.33
KRH73177	Soybean	nucleus	44.52	9.97
GSMUA_Achr10P...	Banana	nucleus	34.19	9.41
TraesCS3B01G067400.1	Wheat	nucleus	35.48	8.7
PGSC0003DMT400021880	Potato	nucleus	29.68	8.6
HORVU3Hr1G010470.4	Barley	cytosol, nucleus	33.55	8.51
TraesCS3D01G054400.1	Wheat	cytosol	34.19	8.4
TraesCS3A01G055100.2	Wheat	cytosol	34.84	7.86
GSMUA_Achr5P28870_001	Banana	cytosol	35.48	7.78
PGSC0003DMT400005965	Potato	nucleus	22.58	6.19
Solyc03g096090.2.1	Tomato	plastid	19.35	6.17
PGSC0003DMT400045033	Potato	nucleus	31.61	4.32
PGSC0003DMT400069903	Potato	cytosol, nucleus, plastid	0.65	0.62
PGSC0003DMT400059907	Potato	plastid	0.65	0.57

Protein Annotations

EnsemblPlants:PGSC0003DMT400031157	EnsemblPlantsGene:PGSC0003DMG402011931	PANTHER:PTHR31949	PANTHER:PTHR31949:SF1	PGSC:PGSC0003DMG402011931	SEG:seg
UniParc:UPI000294D8D3	UniProt:M1AV93	MapMan:35.2	:	:	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG402011931]

Coordinates

chr3:-:35120327..35127221

Molecular Weight (calculated)

17525.4 Da

IEP (calculated)

6.548

GRAVY (calculated)

-0.941

Length

155 amino acids

Sequence
(BLAST)

001: MNRSFRAEES LTGPGQRQRQ PLMGSIRSSD EELSLFLEMR RRENDRNNNR FLQKSDEFDP LGSKSGSSPA FDIASAAPMR RTRTDEFLNA DNDKTDYDWL
101: LTPPGTPLFP SLEMESRKTM MSQLGTSRAH PTALTSRLTN SLPEATSRSN LHLDS

Best Arabidopsis Sequence Match ( AT2G40070.1 )
(BLAST)

001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR

Arabidopsis Description

At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.