CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97756	Soybean	nucleus	83.36	85.86
VIT_13s0067g00570.t01	Wine grape	nucleus	61.71	70.09
PGSC0003DMT400069903	Potato	cytosol, nucleus, plastid	16.96	65.62
PGSC0003DMT400059907	Potato	plastid	17.77	62.86
Bra004992.1-P	Field mustard	nucleus	57.67	60.61
CDY07628	Canola	nucleus	59.61	60.59
CDY60338	Canola	nucleus	59.61	60.49
AT2G40070.1	Thale cress	nucleus	59.13	60.3
Bra000164.1-P	Field mustard	nucleus	59.29	60.26
CDX74811	Canola	nucleus	56.54	59.52
PGSC0003DMT400069902	Potato	cytosol	15.02	58.49
CDY20509	Canola	cytosol	56.7	58.4
Solyc03g096090.2.1	Tomato	plastid	42.97	54.73
KRH14961	Soybean	nucleus	58.0	53.74
KRH00210	Soybean	nucleus	44.43	53.4
PGSC0003DMT400031157	Potato	nucleus	13.09	52.26
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	42.65	51.87
KRH49356	Soybean	nucleus	42.81	51.46
KRH73177	Soybean	nucleus	56.87	50.87
Os01t0141900-01	Rice	nucleus	49.43	50.49
EES02509	Sorghum	nucleus	48.47	50.0
Zm00001d039901_P003	Maize	nucleus	47.82	49.33
PGSC0003DMT400031154	Potato	nucleus	33.28	49.16
GSMUA_Achr10P...	Banana	nucleus	44.1	48.49
GSMUA_Achr8P02330_001	Banana	cytosol	46.53	48.16
TraesCS3D01G054400.1	Wheat	cytosol	47.5	46.59
TraesCS3B01G067400.1	Wheat	nucleus	47.01	46.04
HORVU3Hr1G010470.4	Barley	cytosol, nucleus	45.4	45.99
TraesCS3A01G055100.2	Wheat	cytosol	47.33	42.65
GSMUA_Achr5P28870_001	Banana	cytosol	40.23	35.22
KRH40665	Soybean	nucleus	24.72	26.11
KRH00491	Soybean	mitochondrion, nucleus	24.23	25.64
KRH09557	Soybean	mitochondrion	20.36	25.45
KRH64866	Soybean	cytosol	18.26	24.89
KRH31435	Soybean	nucleus	20.84	11.19
KRG97456	Soybean	nucleus	20.03	10.73
KRH42634	Soybean	nucleus	20.03	10.55
KRH58738	Soybean	nucleus	12.12	8.62

Protein Annotations

EMBL:ACUP02007123	EnsemblPlants:KRH31123	EnsemblPlantsGene:GLYMA_11G228400	EntrezGene:100793022	ncoils:Coil	PANTHER:PTHR31949
PANTHER:PTHR31949:SF1	ProteinID:KRH31123	ProteinID:KRH31123.1	SEG:seg	UniParc:UPI0006EDBF0C	UniProt:A0A0R0HU17
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:32375284..32381183

Molecular Weight (calculated)

65743.1 Da

IEP (calculated)

11.762

GRAVY (calculated)

-0.739

Length

619 amino acids

Sequence
(BLAST)

001: MNRSFRAQES QMHAALKQRE QQFGGLRTSV MKEKEEELAL FLEMKKREKE RNDLLLNSSE EFDAALVSNG GANPIFNISS STPAPVRKTG VDDFLNSEND
101: KNDYDWLLTP PGTPLFPSLE MESRKTVMSR LGTPTTRPVA LKSRLANHQS EPAGRTNLVS KQPTSSPGLS SSSGGTRRPS SSGGPGSRPA TPTGRPTLTT
201: SSKSSRSSTP TLTTSSKSSR PLTPTLTTSL KSSRPSTPTR SMVTSKTTTS TIKPAVSATK HLASATETPV PATKPTIPSR SSTPLSRSAA RSSTPTSRAT
301: LPPSRPTSRA TTPTRRPSSS SEPSIYASSV KACLSPKPAS VTSRQPTHVT ARKQAPVNSR QAAPPSRGTS PTVRSRPWKP SEMPGFSLDA PPNLRTTLPD
401: RPLSATRGRP GAPTSRSSSV EPSSSGRPRR QSCSPSRGRA SNGSVHISGN SMPAVNRGHS KVNDNVSPVV MGNKMVERVI NMRKLAPPMI EDKNSPHSNL
501: SGRSASSPDS SGFGRTLSKK SLDMAIRHMD IRRTIPGNLR PLMTNIPASS LYSVRSGSHH GRTISVSGSP HATSSNASSE LSVNQNGICL DSSEVDDDIG
601: SERCGQSPAS VRGSGVDFL

Best Arabidopsis Sequence Match ( AT2G40070.1 )
(BLAST)

001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR

Arabidopsis Description

At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.