Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH49356 | Soybean | nucleus | 90.1 | 90.1 |
| VIT_08s0007g02160.t01 | Wine grape | nucleus | 57.67 | 54.2 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 47.38 | 47.94 |
| KRG97756 | Soybean | nucleus | 54.95 | 47.09 |
| KRH31123 | Soybean | nucleus | 53.4 | 44.43 |
| GSMUA_Achr10P... | Banana | nucleus | 48.35 | 44.23 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 51.26 | 44.15 |
| Os01t0141900-01 | Rice | nucleus | 49.9 | 42.41 |
| CDY53090 | Canola | nucleus | 41.94 | 42.35 |
| Zm00001d039901_P003 | Maize | nucleus | 48.93 | 42.0 |
| Bra029739.1-P | Field mustard | nucleus | 42.91 | 41.78 |
| EES02509 | Sorghum | nucleus | 48.54 | 41.67 |
| CDY44674 | Canola | nucleus | 42.72 | 41.59 |
| PGSC0003DMT400021880 | Potato | nucleus | 42.91 | 41.31 |
| AT3G09000.1 | Thale cress | nucleus | 43.3 | 41.22 |
| Bra034046.1-P | Field mustard | nucleus | 40.97 | 40.97 |
| Solyc09g014490.2.1 | Tomato | nucleus | 41.94 | 40.37 |
| AT2G38160.3 | Thale cress | nucleus | 25.05 | 40.31 |
| HORVU3Hr1G010470.4 | Barley | cytosol, nucleus | 47.57 | 40.1 |
| KRH14961 | Soybean | nucleus | 51.65 | 39.82 |
| CDY22176 | Canola | nucleus | 39.61 | 39.53 |
| TraesCS3D01G054400.1 | Wheat | cytosol | 47.77 | 38.99 |
| TraesCS3B01G067400.1 | Wheat | nucleus | 47.57 | 38.77 |
| CDX93325 | Canola | nucleus | 24.27 | 37.65 |
| KRH73177 | Soybean | nucleus | 49.9 | 37.14 |
| CDY55901 | Canola | nucleus | 35.34 | 35.97 |
| CDY48118 | Canola | nucleus | 35.34 | 35.97 |
| Bra028894.1-P | Field mustard | nucleus | 35.34 | 35.97 |
| TraesCS3A01G055100.2 | Wheat | cytosol | 47.96 | 35.95 |
| AT5G01280.1 | Thale cress | mitochondrion, nucleus | 33.4 | 35.54 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 43.88 | 31.97 |
| Bra017135.1-P | Field mustard | nucleus | 22.33 | 30.1 |
| CDY18403 | Canola | nucleus | 21.75 | 29.32 |
| KRH40665 | Soybean | nucleus | 27.18 | 23.89 |
| KRH09557 | Soybean | mitochondrion | 22.33 | 23.23 |
| KRH00491 | Soybean | mitochondrion, nucleus | 26.21 | 23.08 |
| KRH64866 | Soybean | cytosol | 20.19 | 22.91 |
| KRH31435 | Soybean | nucleus | 19.61 | 8.76 |
| KRH42634 | Soybean | nucleus | 19.61 | 8.6 |
| KRG97456 | Soybean | nucleus | 19.03 | 8.48 |
| KRH58738 | Soybean | nucleus | 12.82 | 7.59 |
Protein Annotations
| EMBL:ACUP02011406 | EnsemblPlants:KRH00210 | EnsemblPlantsGene:GLYMA_18G199700 | EntrezGene:100812685 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF1 |
| ProteinID:KRH00210 | ProteinID:KRH00210.1 | ProteinID:KRH00211.1 | ProteinID:KRH00212.1 | SEG:seg | UniParc:UPI0001B641CA |
| UniProt:A0A0R0FAQ3 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:47885510..47890397
Molecular Weight (calculated)
55197.2 Da
IEP (calculated)
11.272
GRAVY (calculated)
-0.842
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMKQRDEEL SLFLEMRRRE KENEKNNLLL LQNSEELDLS NLESNHGASM ISKMVSSVPP RKNGIEEFLN SENDKSDYEW LLAPPDAPLF PTLEKESQIS
101: VKSEQETRNA RPTALKPRVA NIQAEPASRS HVISKHHASM PGLGSSTNGS RRPSSSGGPT SATSRSSTPF GRPTLPSTTK SSRPSTPTSR ATLTSAKSTV
201: PPVRSSTPTR STARSSTPTT RPSLAPPKTS QRSATPTLRS STPSRAFGAN APPTRPSSAS KARPGPIVAK NPVQSRGSSP SVRSRPWEPS QIPGFSLDAP
301: PNLKTSLSDR PASATRTRPG ALNSRSSSVD ASSNAKSRRQ ASTPSKGRTT TGLVHNNHTS MQVLSRARFT DGDDESPVVI GTKMVERVVN MRKLAPPKHE
401: DHHSSRDNSY GKSSSGSSGF GTTLSKKSLD MAMRHMDIRR SIQGNLRPLV TSIPASSMYS VRSGSSSKSR TVSASDSPLA TSSTTSSEPS VNTNSMSYDG
501: SGVEENDFAC ERGNS
101: VKSEQETRNA RPTALKPRVA NIQAEPASRS HVISKHHASM PGLGSSTNGS RRPSSSGGPT SATSRSSTPF GRPTLPSTTK SSRPSTPTSR ATLTSAKSTV
201: PPVRSSTPTR STARSSTPTT RPSLAPPKTS QRSATPTLRS STPSRAFGAN APPTRPSSAS KARPGPIVAK NPVQSRGSSP SVRSRPWEPS QIPGFSLDAP
301: PNLKTSLSDR PASATRTRPG ALNSRSSSVD ASSNAKSRRQ ASTPSKGRTT TGLVHNNHTS MQVLSRARFT DGDDESPVVI GTKMVERVVN MRKLAPPKHE
401: DHHSSRDNSY GKSSSGSSGF GTTLSKKSLD MAMRHMDIRR SIQGNLRPLV TSIPASSMYS VRSGSSSKSR TVSASDSPLA TSSTTSSEPS VNTNSMSYDG
501: SGVEENDFAC ERGNS
001: MLTHDRDEEL SLFLEMRRRE KEHRADSLLT GSDNVSINAT LTAAAAAALS GVSETASSQR YPLRRTAAEN FLYSENEKSD YDWLLTPPGT PQFEKESHRS
101: VMNQHDAPNS RPTVLKSRLG NCREDIVSGN NNKPQTSSSS VAGLRRPSSS GSSRSTSRPA TPTRRSTTPT TSTSRPVTTR ASNSRSSTPT SRATLTAARA
201: TTSTAAPRTT TTSSGSARSA TPTRSNPRPS SASSKKPVSR PATPTRRPST PTGPSIVSSK APSRGTSPSP TVNSLSKAPS RGTSPSPTLN SSRPWKPPEM
301: PGFSLEAPPN LRTTLADRPV SASRGRPGVA SAPGSRSGSI ERGGGPTSGG SGNARRQSCS PSRGRAPIGN TNGSLTGVRG RAKASNGGSG CDNLSPVAMG
401: NKMVERVVNM RKLGPPRLTE NGGRGSGKSS SAFNSLGYGR NLSKSSIDMA IRHMDIRRGM TGNLRPLVTK VPASSMYSVR SRPGSVSSSP VATSSTVSSS
501: DPSVDNINIL CLDGNEAEND DLLSERSYAA SPRNQYPKFT S
101: VMNQHDAPNS RPTVLKSRLG NCREDIVSGN NNKPQTSSSS VAGLRRPSSS GSSRSTSRPA TPTRRSTTPT TSTSRPVTTR ASNSRSSTPT SRATLTAARA
201: TTSTAAPRTT TTSSGSARSA TPTRSNPRPS SASSKKPVSR PATPTRRPST PTGPSIVSSK APSRGTSPSP TVNSLSKAPS RGTSPSPTLN SSRPWKPPEM
301: PGFSLEAPPN LRTTLADRPV SASRGRPGVA SAPGSRSGSI ERGGGPTSGG SGNARRQSCS PSRGRAPIGN TNGSLTGVRG RAKASNGGSG CDNLSPVAMG
401: NKMVERVVNM RKLGPPRLTE NGGRGSGKSS SAFNSLGYGR NLSKSSIDMA IRHMDIRRGM TGNLRPLVTK VPASSMYSVR SRPGSVSSSP VATSSTVSSS
501: DPSVDNINIL CLDGNEAEND DLLSERSYAA SPRNQYPKFT S
Arabidopsis Description
AT3g09000/T16O11_4 [Source:UniProtKB/TrEMBL;Acc:Q9S7V5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.