Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55901 | Canola | nucleus | 99.01 | 99.01 |
| AT5G01280.1 | Thale cress | mitochondrion, nucleus | 44.86 | 46.9 |
| CDY44674 | Canola | nucleus | 43.87 | 41.97 |
| CDY22176 | Canola | nucleus | 42.49 | 41.67 |
| CDY53090 | Canola | nucleus | 39.72 | 39.41 |
| KRH49356 | Soybean | nucleus | 36.56 | 35.92 |
| KRH00210 | Soybean | nucleus | 35.97 | 35.34 |
| CDY20509 | Canola | cytosol | 40.12 | 33.78 |
| VIT_08s0007g02160.t01 | Wine grape | nucleus | 36.56 | 33.76 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 33.79 | 33.6 |
| CDX74811 | Canola | nucleus | 38.93 | 33.5 |
| Os01t0141900-01 | Rice | nucleus | 39.13 | 32.67 |
| Zm00001d039901_P003 | Maize | nucleus | 38.34 | 32.33 |
| EES02509 | Sorghum | nucleus | 38.14 | 32.17 |
| CDY07628 | Canola | nucleus | 37.55 | 31.2 |
| CDY60338 | Canola | nucleus | 36.96 | 30.66 |
| HORVU3Hr1G010470.4 | Barley | cytosol, nucleus | 36.76 | 30.44 |
| CDX93325 | Canola | nucleus | 19.96 | 30.42 |
| TraesCS3B01G067400.1 | Wheat | nucleus | 37.94 | 30.38 |
| GSMUA_Achr10P... | Banana | nucleus | 33.79 | 30.37 |
| PGSC0003DMT400021880 | Potato | nucleus | 32.02 | 30.28 |
| TraesCS3D01G054400.1 | Wheat | cytosol | 37.55 | 30.11 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 35.57 | 30.1 |
| Solyc09g014490.2.1 | Tomato | nucleus | 31.23 | 29.53 |
| TraesCS3A01G055100.2 | Wheat | cytosol | 38.14 | 28.09 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 32.61 | 23.34 |
| CDX73938 | Canola | nucleus | 23.91 | 22.41 |
| CDY00658 | Canola | nucleus | 23.91 | 22.41 |
| CDY35995 | Canola | nucleus | 25.49 | 21.25 |
| CDY18403 | Canola | nucleus | 16.01 | 21.2 |
| CDY27987 | Canola | nucleus | 25.49 | 21.18 |
| CDX90111 | Canola | nucleus | 20.55 | 9.8 |
| CDY27635 | Canola | nucleus | 20.95 | 9.41 |
| CDY11763 | Canola | nucleus | 19.96 | 9.39 |
| CDX84901 | Canola | mitochondrion, nucleus | 20.55 | 9.12 |
Protein Annotations
| EnsemblPlants:CDY48118 | EnsemblPlantsGene:GSBRNA2T00088817001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF1 | ProteinID:CDY48118 | ProteinID:CDY48118.1 |
| SEG:seg | UniParc:UPI0004EEAD2A | UniProt:A0A078IG55 | MapMan:35.2 | : | : |
Description
BnaC02g03750DBnaC02g03750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IG55]
Coordinates
chrLK032754:-:140016..142354
Molecular Weight (calculated)
54275.1 Da
IEP (calculated)
11.791
GRAVY (calculated)
-0.880
Length
506 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTQDRDEEL VLFLEIGRLE KSHQASLLTK FSDHCKSNTT SMSSQQYPPR RTAADNFLYS EDEKSDYDWL VTPPDSPSKS SVNQLDAPDA TLTMALKSRL
101: ESCREEERDR TSSKKQTIGL KRPTSSNSSR STSRPSTPAR RSTTPATRST TPTSRVTSKG ARANLTSSST SSVRPTSRPS TPTRRPSSSG TSRATLTSSS
201: TSTVRPTSRP STPPRRPSSS GTSRANLTTA RATTGTATST RSIIRPISAP STKPGSRSST PTRRPPTPTG SLTVSRSKPT KPVCKPAPSP TLRSRPWEPY
301: EMPGFSLEAP SNLRTTLPDR PQTASSRRTT AFGASSSRSS SIERTVARRQ SCSPSRNRAP ISNANRPAGR SKTSNDDGEL ISPVAKGAQM IERVVSVRKL
401: APPRLTEKGG SNAGKSSSGA DGVGFGRNLS KSSFDMALRH MDIKQGSMKG NFRQLATKVP AASLYSVRSS GTRRKRPVSS SGSSESSSVN ILCLDGSDDN
501: LSDISH
101: ESCREEERDR TSSKKQTIGL KRPTSSNSSR STSRPSTPAR RSTTPATRST TPTSRVTSKG ARANLTSSST SSVRPTSRPS TPTRRPSSSG TSRATLTSSS
201: TSTVRPTSRP STPPRRPSSS GTSRANLTTA RATTGTATST RSIIRPISAP STKPGSRSST PTRRPPTPTG SLTVSRSKPT KPVCKPAPSP TLRSRPWEPY
301: EMPGFSLEAP SNLRTTLPDR PQTASSRRTT AFGASSSRSS SIERTVARRQ SCSPSRNRAP ISNANRPAGR SKTSNDDGEL ISPVAKGAQM IERVVSVRKL
401: APPRLTEKGG SNAGKSSSGA DGVGFGRNLS KSSFDMALRH MDIKQGSMKG NFRQLATKVP AASLYSVRSS GTRRKRPVSS SGSSESSSVN ILCLDGSDDN
501: LSDISH
001: MRRCEKRHRP TLLMESDNTS STTAMSSQQY PVRRTAGENL LYSDGEKSDY EWLVTPPGSP SRNVTNHLNA PDDNLMTLIS RLENYSKEES EHQTTSLHSS
101: SSVSGIRRPS SSSSSRSTSR PPTPTRKSKT PAKRPSTPTS RATSTTTRAT LTSSSTTSST RSWSRPSSSS GTGTSRVTLT AARATRPTTS TDQQTTGSAT
201: STRSNNRPMS APNSKPGSRS STPTRRPSTP NGSSTVLRSK PTKPLSKPAL SLEASPIVRS RPWEPYEMPG FSVEAPSNLR TTLPDRPQTA SSSRTRAFDA
301: SSSSRSASTE RDVAKRQSCS PSRSRAPNGN VNGAVPSLRG QRAKTNNDDG RLISHAAKGN QKVEKVVNMR KLATPRLTES GSRRLGGGGG DSSAGKSSSG
401: SGGFGFGRNL SKSSIDMALR HMDVRKGSMA GNFRHSVTKA PATSVYSVRS CRNRPVSSSR SSESSVNILC LDGSDDNLSD MSCS
101: SSVSGIRRPS SSSSSRSTSR PPTPTRKSKT PAKRPSTPTS RATSTTTRAT LTSSSTTSST RSWSRPSSSS GTGTSRVTLT AARATRPTTS TDQQTTGSAT
201: STRSNNRPMS APNSKPGSRS STPTRRPSTP NGSSTVLRSK PTKPLSKPAL SLEASPIVRS RPWEPYEMPG FSVEAPSNLR TTLPDRPQTA SSSRTRAFDA
301: SSSSRSASTE RDVAKRQSCS PSRSRAPNGN VNGAVPSLRG QRAKTNNDDG RLISHAAKGN QKVEKVVNMR KLATPRLTES GSRRLGGGGG DSSAGKSSSG
401: SGGFGFGRNL SKSSIDMALR HMDVRKGSMA GNFRHSVTKA PATSVYSVRS CRNRPVSSSR SSESSVNILC LDGSDDNLSD MSCS
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 /.../e: NCBI BLink). [Source:TAIR;Acc:AT5G01280]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.