Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11763 | Canola | nucleus | 87.09 | 85.87 |
| Bra010916.1-P | Field mustard | nucleus | 85.01 | 83.83 |
| AT1G27850.1 | Thale cress | nucleus | 57.4 | 53.05 |
| CDY27635 | Canola | nucleus | 52.4 | 49.33 |
| CDX84901 | Canola | mitochondrion, nucleus | 52.03 | 48.42 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 34.31 | 30.74 |
| KRG97456 | Soybean | nucleus | 31.1 | 28.55 |
| KRH31435 | Soybean | nucleus | 31.01 | 28.53 |
| PGSC0003DMT400045033 | Potato | nucleus | 29.88 | 27.93 |
| GSMUA_Achr2P20960_001 | Banana | nucleus | 26.2 | 27.88 |
| Solyc05g014640.2.1 | Tomato | nucleus | 29.03 | 27.21 |
| KRH42634 | Soybean | nucleus | 29.5 | 26.64 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 24.79 | 24.4 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 25.64 | 22.99 |
| Os12t0239000-01 | Rice | nucleus | 24.69 | 22.32 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 24.13 | 21.71 |
| TraesCS5B01G121900.1 | Wheat | nucleus | 24.13 | 21.68 |
| Zm00001d023797_P004 | Maize | nucleus | 24.22 | 21.54 |
| Zm00001d041136_P002 | Maize | nucleus | 23.56 | 21.44 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 23.75 | 21.41 |
| KXG23347 | Sorghum | nucleus | 23.66 | 21.31 |
| Os12t0239200-01 | Rice | nucleus | 23.75 | 21.28 |
| TraesCSU01G135900.1 | Wheat | nucleus | 23.56 | 21.17 |
| Zm00001d041124_P002 | Maize | nucleus | 22.43 | 21.01 |
| CDY00658 | Canola | nucleus | 10.46 | 20.56 |
| CDY48118 | Canola | nucleus | 9.8 | 20.55 |
| CDY55901 | Canola | nucleus | 9.71 | 20.36 |
| CDY22176 | Canola | nucleus | 9.8 | 20.16 |
| CDY27987 | Canola | nucleus | 11.5 | 20.03 |
| CDX73938 | Canola | nucleus | 10.08 | 19.81 |
| CDY35995 | Canola | nucleus | 11.31 | 19.77 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 21.77 | 19.66 |
| CDY20509 | Canola | cytosol | 11.03 | 19.47 |
| CDX74811 | Canola | nucleus | 10.65 | 19.22 |
| CDY07628 | Canola | nucleus | 10.74 | 18.72 |
| CDY60338 | Canola | nucleus | 10.74 | 18.69 |
| CDY44674 | Canola | nucleus | 8.86 | 17.77 |
| CDY53090 | Canola | nucleus | 8.48 | 17.65 |
| CDX93325 | Canola | nucleus | 4.9 | 15.66 |
| CDY18403 | Canola | nucleus | 4.62 | 12.83 |
Protein Annotations
| EnsemblPlants:CDX90111 | EnsemblPlantsGene:GSBRNA2T00150629001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF3 | ProteinID:CDX90111 | ProteinID:CDX90111.1 |
| SEG:seg | UniParc:UPI0004EEBAE9 | MapMan:35.2 | : | : | : |
Description
BnaA08g18730D
Coordinates
chrLK031862:+:141781..146788
Molecular Weight (calculated)
115601.0 Da
IEP (calculated)
5.099
GRAVY (calculated)
-0.819
Length
1061 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSPALRCS PGKEHRRGHS IEYGTLFRDN DEEDLALFSE LQEKERDDFL LQSSDDLEDA FSTKLKHFSE FTIPIQGESS RLLSAEEDKN DYDWLLTPPD
0101: TPLFPSLDDE PQAASVGTRG RPQSQTSLSR SSTMEKRRRS SKGSPSPNRL STSPRADNMQ QQIRGRPSSS RHPSPASGQR SVTPVRRISP SPGKPVSSRS
0201: STPTSRRMST GSTTTAAPPA GRGTSPVRSS RGNSASPKIK VWQSNIPGFP LDAPPNLRTS LGDRPASYVR GSSPASTRSR QSVSPSASRS VSSSHSHEDL
0301: LHPIQSIPVG SSERAVSKRA SLSPNSRSSR SSKLQSPGSA PRRPFESALR QMDHPKSHHS MFRPLASSLP STGIYSGKSS SSSYHHLMLR HSSATVGSNS
0401: SSSQVIGFMP DTKGSDSIQS EVEKLAYPDK HGDIMDVLNE GSRHESSFSD VDQGFAVESE SSVNEEVNHH VSDFLEGDDL ETMEVCGRCG SHYRATEATR
0501: SEINICPDCR EEHSFMETDS PGTTRALDEN SQSQENFDEK ESIVEKTPAI SVLESLPVAM VEIEQCDDSY EQEENHLQES SIFRALGEQD DEIESSTGCG
0601: LLSTETKDTQ TQLSEKDHDV KIGSSEGRRG LPMLIKRSVS MKSPITQASN SSGFTRSYDG FSYLRDKSMS LRSSTETTSA SSSWDYGSSI RKGSHVRHQS
0701: GSTLDMETHR YETNSKFLSS MSSNACQALN AVPADSFEVF AAQMTCTNDE THQESHYELK DPKCNETNVM NGSIGLSTNV VGVLEEHDPV ITENGFSENR
0801: DDVDNTVMSK VEISESPAHV RNTSEVGAST ATDDCSLYDH SKLQEKDVNE TPHHGSSTTT SSEIEPESCK IPESECNVNT VDDDCSEKSM AHASVDHHNS
0901: LPPVNEISDE STVLVECPGQ KEPKSLTLEE ATDAILFCSS IVHDLVYQAA SIAMDKARDV AATEEEEVLR PTVTVLGKSD ANRSSYTSGG GTKTKKQSSK
1001: GAKASRKQTE TEENIEVHIE NDENAGEAAR MISNVGVPPS NKADNLKPPP KLENKCNCSI M
0101: TPLFPSLDDE PQAASVGTRG RPQSQTSLSR SSTMEKRRRS SKGSPSPNRL STSPRADNMQ QQIRGRPSSS RHPSPASGQR SVTPVRRISP SPGKPVSSRS
0201: STPTSRRMST GSTTTAAPPA GRGTSPVRSS RGNSASPKIK VWQSNIPGFP LDAPPNLRTS LGDRPASYVR GSSPASTRSR QSVSPSASRS VSSSHSHEDL
0301: LHPIQSIPVG SSERAVSKRA SLSPNSRSSR SSKLQSPGSA PRRPFESALR QMDHPKSHHS MFRPLASSLP STGIYSGKSS SSSYHHLMLR HSSATVGSNS
0401: SSSQVIGFMP DTKGSDSIQS EVEKLAYPDK HGDIMDVLNE GSRHESSFSD VDQGFAVESE SSVNEEVNHH VSDFLEGDDL ETMEVCGRCG SHYRATEATR
0501: SEINICPDCR EEHSFMETDS PGTTRALDEN SQSQENFDEK ESIVEKTPAI SVLESLPVAM VEIEQCDDSY EQEENHLQES SIFRALGEQD DEIESSTGCG
0601: LLSTETKDTQ TQLSEKDHDV KIGSSEGRRG LPMLIKRSVS MKSPITQASN SSGFTRSYDG FSYLRDKSMS LRSSTETTSA SSSWDYGSSI RKGSHVRHQS
0701: GSTLDMETHR YETNSKFLSS MSSNACQALN AVPADSFEVF AAQMTCTNDE THQESHYELK DPKCNETNVM NGSIGLSTNV VGVLEEHDPV ITENGFSENR
0801: DDVDNTVMSK VEISESPAHV RNTSEVGAST ATDDCSLYDH SKLQEKDVNE TPHHGSSTTT SSEIEPESCK IPESECNVNT VDDDCSEKSM AHASVDHHNS
0901: LPPVNEISDE STVLVECPGQ KEPKSLTLEE ATDAILFCSS IVHDLVYQAA SIAMDKARDV AATEEEEVLR PTVTVLGKSD ANRSSYTSGG GTKTKKQSSK
1001: GAKASRKQTE TEENIEVHIE NDENAGEAAR MISNVGVPPS NKADNLKPPP KLENKCNCSI M
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.