Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G124400.1 | Wheat | nucleus | 94.92 | 95.24 |
| TraesCSU01G135900.1 | Wheat | nucleus | 94.67 | 94.67 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 90.18 | 90.33 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 82.39 | 82.81 |
| Os12t0239200-01 | Rice | nucleus | 61.64 | 61.49 |
| KXG23347 | Sorghum | nucleus | 56.39 | 56.54 |
| Zm00001d023797_P004 | Maize | nucleus | 53.43 | 52.89 |
| Zm00001d041136_P002 | Maize | nucleus | 50.97 | 51.63 |
| GSMUA_Achr2P20960_001 | Banana | nucleus | 30.65 | 36.31 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 30.74 | 30.68 |
| KRH31435 | Soybean | nucleus | 29.72 | 30.44 |
| KRG97456 | Soybean | nucleus | 29.38 | 30.02 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 29.55 | 29.48 |
| PGSC0003DMT400045033 | Potato | nucleus | 28.28 | 29.43 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 26.84 | 29.41 |
| Solyc05g014640.2.1 | Tomato | nucleus | 27.52 | 28.71 |
| KRH42634 | Soybean | nucleus | 28.45 | 28.6 |
| CDY27635 | Canola | nucleus | 24.05 | 25.2 |
| AT1G27850.1 | Thale cress | nucleus | 24.47 | 25.17 |
| CDX84901 | Canola | mitochondrion, nucleus | 24.22 | 25.09 |
| CDY11763 | Canola | nucleus | 22.18 | 24.35 |
| Bra032851.1-P | Field mustard | nucleus | 23.12 | 24.22 |
| CDX90111 | Canola | nucleus | 21.68 | 24.13 |
| Bra010916.1-P | Field mustard | nucleus | 21.93 | 24.07 |
| TraesCS3B01G374300.1 | Wheat | nucleus | 7.87 | 16.85 |
| TraesCS3B01G067400.1 | Wheat | nucleus | 8.72 | 16.3 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 7.79 | 14.44 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G121900.1 | EnsemblPlantsGene:TraesCS5B01G121900 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF10 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr5B:+:217905251..217915361
Molecular Weight (calculated)
128634.0 Da
IEP (calculated)
5.083
GRAVY (calculated)
-0.720
Length
1181 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPHSPSRRRS PSRESAHRRV NDFGNALPAK PKDDELTLFA DMQKTEIENF LLEPSEDFDE SISKLSFFPD VKLGINVPAR GESHDLLKVD GDKNDYEWLL
0101: TPPETPLFRS LDDEEERSVG QASRGRAQSK AVQISRPSTM DNAQRSSRSS ASPNRLSLSP RSMARTKSPI SASRASPPLS VQPPTPSRRP STPPAAKILT
0201: LPQRSASPVS RRMSTGSSGS ALNGTRGASP VKANHRSSSP KPQGWQSNDP AFSYNAPPNL RTSLPDRSVS RSRGGSPTSF SGLDTGSRGR RQSMSPTPTR
0301: RASSSHSIER DRLSTHSKAS ATSSGDDDLD SMQSISIGYS SSPAVKKSLA VMKTRSIASS KKLSKNFSPI SAPKWSFDSA VWLMDHRKGP QDRFRPLLSS
0401: VPATTFGAGK INNVHKPMFS HNSSMTTSSN ASSEHGATFG PYVESDQEQQ DLIGEWEADD GLRVHEDIFM FDKLDELNEE TSFNKNTKHV EDSPIQVKYV
0501: KSDKHDFDME RWAANQTAYD GANSSQVGHG EMATCSRCGM SFNVMDLDGK GDSCEECSSK VGGFSADRML WTSEAHQHDN KIVNFGPYTE SEPSMAPDSV
0601: DYSKLASLGH QTVNNEPSAD CTEKCPPGQS MVDTDEDMLL GQEVVNHEEN MRPYHVSDSL LENEDDISFS RSSVSNHQQT EPTSAEHGPY GGQMGSCNHG
0701: LPPCLSESNC QHNVAVSETA FGDNSHQLGS NIHPFPKVES AEGAGISVLL HQKSSSNKWQ IMEGRALAAT NIVCSEPYYT RDGINMMKCS FGRDSSSASS
0801: IDLGSSRQSD ARFERHSSSK KGDFEKAQLS STMSHQSIAS VSDMSVSGSS ASLCHQSDAI EDTCSRIDTL ESSASRTVVS TGEDGSSKDA VSNALECLST
0901: ARPIVNDDIL VDLNSSSIDR SSETEDVINM GRMADNDHSS TNMCLSQMEE PINVQESSAA EGSCMLKTDE DTSDTVQCCL AGTPEYPSEE NLDNLIMQSQ
1001: SEAVQDSIEE HILDDCCVSA ISEEDVLVSR TGTSIIELPN DEKSPQAVEG SRKQIQRCFT LEEATDTILL CSSIVHDLAY KAATIALEHE QESERPRPTV
1101: TIVGKSIRDE DGFLKLPHRR TPNRKVKRKR LEGETTTITE TAEKESIVED PSPVPSASGI TRASDNMKPP KLESKCNCVI M
0101: TPPETPLFRS LDDEEERSVG QASRGRAQSK AVQISRPSTM DNAQRSSRSS ASPNRLSLSP RSMARTKSPI SASRASPPLS VQPPTPSRRP STPPAAKILT
0201: LPQRSASPVS RRMSTGSSGS ALNGTRGASP VKANHRSSSP KPQGWQSNDP AFSYNAPPNL RTSLPDRSVS RSRGGSPTSF SGLDTGSRGR RQSMSPTPTR
0301: RASSSHSIER DRLSTHSKAS ATSSGDDDLD SMQSISIGYS SSPAVKKSLA VMKTRSIASS KKLSKNFSPI SAPKWSFDSA VWLMDHRKGP QDRFRPLLSS
0401: VPATTFGAGK INNVHKPMFS HNSSMTTSSN ASSEHGATFG PYVESDQEQQ DLIGEWEADD GLRVHEDIFM FDKLDELNEE TSFNKNTKHV EDSPIQVKYV
0501: KSDKHDFDME RWAANQTAYD GANSSQVGHG EMATCSRCGM SFNVMDLDGK GDSCEECSSK VGGFSADRML WTSEAHQHDN KIVNFGPYTE SEPSMAPDSV
0601: DYSKLASLGH QTVNNEPSAD CTEKCPPGQS MVDTDEDMLL GQEVVNHEEN MRPYHVSDSL LENEDDISFS RSSVSNHQQT EPTSAEHGPY GGQMGSCNHG
0701: LPPCLSESNC QHNVAVSETA FGDNSHQLGS NIHPFPKVES AEGAGISVLL HQKSSSNKWQ IMEGRALAAT NIVCSEPYYT RDGINMMKCS FGRDSSSASS
0801: IDLGSSRQSD ARFERHSSSK KGDFEKAQLS STMSHQSIAS VSDMSVSGSS ASLCHQSDAI EDTCSRIDTL ESSASRTVVS TGEDGSSKDA VSNALECLST
0901: ARPIVNDDIL VDLNSSSIDR SSETEDVINM GRMADNDHSS TNMCLSQMEE PINVQESSAA EGSCMLKTDE DTSDTVQCCL AGTPEYPSEE NLDNLIMQSQ
1001: SEAVQDSIEE HILDDCCVSA ISEEDVLVSR TGTSIIELPN DEKSPQAVEG SRKQIQRCFT LEEATDTILL CSSIVHDLAY KAATIALEHE QESERPRPTV
1101: TIVGKSIRDE DGFLKLPHRR TPNRKVKRKR LEGETTTITE TAEKESIVED PSPVPSASGI TRASDNMKPP KLESKCNCVI M
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.