Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27635 | Canola | nucleus | 80.0 | 80.92 |
| Bra032851.1-P | Field mustard | nucleus | 64.3 | 65.04 |
| AT1G27850.1 | Thale cress | nucleus | 56.4 | 56.01 |
| CDX90111 | Canola | nucleus | 48.42 | 52.03 |
| CDY11763 | Canola | nucleus | 48.16 | 51.02 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 34.56 | 33.28 |
| Solyc05g014640.2.1 | Tomato | nucleus | 32.54 | 32.77 |
| PGSC0003DMT400045033 | Potato | nucleus | 32.54 | 32.69 |
| KRH31435 | Soybean | nucleus | 32.11 | 31.74 |
| KRG97456 | Soybean | nucleus | 31.67 | 31.23 |
| KRH42634 | Soybean | nucleus | 31.93 | 30.98 |
| GSMUA_Achr2P20960_001 | Banana | nucleus | 25.53 | 29.19 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 26.14 | 25.19 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 23.77 | 25.14 |
| Zm00001d041124_P002 | Maize | nucleus | 24.56 | 24.71 |
| Os12t0239000-01 | Rice | nucleus | 25.26 | 24.53 |
| Os12t0239200-01 | Rice | nucleus | 25.18 | 24.24 |
| TraesCS5B01G121900.1 | Wheat | nucleus | 25.09 | 24.22 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 24.74 | 23.92 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 24.65 | 23.87 |
| TraesCSU01G135900.1 | Wheat | nucleus | 24.56 | 23.71 |
| Zm00001d041136_P002 | Maize | nucleus | 24.21 | 23.67 |
| KXG23347 | Sorghum | nucleus | 24.3 | 23.51 |
| Zm00001d023797_P004 | Maize | nucleus | 24.12 | 23.05 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 22.89 | 22.21 |
| CDY00658 | Canola | nucleus | 9.91 | 20.93 |
| CDY55901 | Canola | nucleus | 9.12 | 20.55 |
| CDY48118 | Canola | nucleus | 9.12 | 20.55 |
| CDX73938 | Canola | nucleus | 9.47 | 20.0 |
| CDX74811 | Canola | nucleus | 10.26 | 19.9 |
| CDY20509 | Canola | cytosol | 10.35 | 19.63 |
| CDY35995 | Canola | nucleus | 10.0 | 18.78 |
| CDY07628 | Canola | nucleus | 10.0 | 18.72 |
| CDY60338 | Canola | nucleus | 10.0 | 18.69 |
| CDY22176 | Canola | nucleus | 8.42 | 18.6 |
| CDY27987 | Canola | nucleus | 9.91 | 18.55 |
| CDY44674 | Canola | nucleus | 8.33 | 17.96 |
| CDY53090 | Canola | nucleus | 7.72 | 17.25 |
| CDX93325 | Canola | nucleus | 4.65 | 15.96 |
| CDY18403 | Canola | nucleus | 4.04 | 12.04 |
Protein Annotations
| EnsemblPlants:CDX84901 | EnsemblPlantsGene:GSBRNA2T00142226001 | ncoils:Coil | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF3 | ProteinID:CDX84901 |
| ProteinID:CDX84901.1 | SEG:seg | UniParc:UPI0004EE143E | MapMan:35.2 | : | : |
Description
BnaC05g21540D
Coordinates
chrLK031839:-:38154..42757
Molecular Weight (calculated)
123599.0 Da
IEP (calculated)
5.653
GRAVY (calculated)
-0.741
Length
1140 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSPALRCS PGRGLPGNKH RRGHSIEYGI LFRDKDEDLT LFNELQDKER DDFLLHSSDD LEDVFSTKLK HFSEFNIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDEPPAASV GRIGRPQSQI SLSRSSTMEK RRRSSRGSAS PNRLSTSPCG DNMQQTRGRP SSARHPSPAS GPRSVTPPVR RISPSPGKPS
0201: RSSTPTSRRM STGSTTTIAS PALRGTSPVR TSSRGNSASP KVKVWQSNIP GFSLDAPPNL RTSLGDRPAS YVRGSSPASR NGRDAAASTR SRQSVSPSAS
0301: RSVSSSHSHE RDRLSSHSKG SVASSGDADL QSLQSIPVRS SEPAVSKRAS LSPNSRNSRS SKLQSPGSAP RRPFESALRQ MDHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHLMLRHS SPTVGSHSSS SQVTGFVPDT KGSDPIPVVQ SELENLDHPD KHGQVNAFGM VDLLNEGSRH ESYISDQLGD LDQSQAVECE
0501: SSVNEEASHH VSDVENTSTL GSHHLRNDSL EEVGLETMEV CVRCGSHYRV TEETRSEINI CPDCREEHNF VETDPSGTTR ALDGNFLKQP HDIFDEKESF
0601: VDTSPAIDVL ESLPDAMVEA EILKTGENIG QCGDSYEQEH NNLRESPLSR ALVVETLDHQ DEFQSSTSLS HTGTTDTQLS EKHHDLKIGA SEVRGVPLLI
0701: KRSVSMKSPI TKANNSSGLT RSYEGFSYLR DISISLRSST ETTSASSSWD YGSSIRKGSH VRHQSGSTLD METHRYDTNS KSLSSMSSSS GVSSHTCKAL
0801: NVMPADSFEV SASQTPDETH QESHPELQET NVMNADFGED DGGSIGLSTK VVGALAEHKL VITDNEFCEE GDGDGDDIAN NVIKIEIGES PAHVRSTSEI
0901: GALPVTDDQS ELQEKDGNES PRHCSSTMTA AEIEFESCAL ETHGLGVHDE ILESEECYLN AVDDCSEKSM GHASVDHHNS LAPVNKFLDE STVIVECPGG
1001: KETKSLTLEE ATDTILFCSS IVHDLVYEAA TIAMDKTKNV PVEQELLHPT VTVLGKSNAN RFSSYGRGGG TKEKKKQSSK ARRKLQRETE EKTEVDIEND
1101: ENASEAAAMM SNVGVPPPPS KGESLKPPPK LENKCNCSIM
0101: TPPDTPLFPS LDDEPPAASV GRIGRPQSQI SLSRSSTMEK RRRSSRGSAS PNRLSTSPCG DNMQQTRGRP SSARHPSPAS GPRSVTPPVR RISPSPGKPS
0201: RSSTPTSRRM STGSTTTIAS PALRGTSPVR TSSRGNSASP KVKVWQSNIP GFSLDAPPNL RTSLGDRPAS YVRGSSPASR NGRDAAASTR SRQSVSPSAS
0301: RSVSSSHSHE RDRLSSHSKG SVASSGDADL QSLQSIPVRS SEPAVSKRAS LSPNSRNSRS SKLQSPGSAP RRPFESALRQ MDHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHLMLRHS SPTVGSHSSS SQVTGFVPDT KGSDPIPVVQ SELENLDHPD KHGQVNAFGM VDLLNEGSRH ESYISDQLGD LDQSQAVECE
0501: SSVNEEASHH VSDVENTSTL GSHHLRNDSL EEVGLETMEV CVRCGSHYRV TEETRSEINI CPDCREEHNF VETDPSGTTR ALDGNFLKQP HDIFDEKESF
0601: VDTSPAIDVL ESLPDAMVEA EILKTGENIG QCGDSYEQEH NNLRESPLSR ALVVETLDHQ DEFQSSTSLS HTGTTDTQLS EKHHDLKIGA SEVRGVPLLI
0701: KRSVSMKSPI TKANNSSGLT RSYEGFSYLR DISISLRSST ETTSASSSWD YGSSIRKGSH VRHQSGSTLD METHRYDTNS KSLSSMSSSS GVSSHTCKAL
0801: NVMPADSFEV SASQTPDETH QESHPELQET NVMNADFGED DGGSIGLSTK VVGALAEHKL VITDNEFCEE GDGDGDDIAN NVIKIEIGES PAHVRSTSEI
0901: GALPVTDDQS ELQEKDGNES PRHCSSTMTA AEIEFESCAL ETHGLGVHDE ILESEECYLN AVDDCSEKSM GHASVDHHNS LAPVNKFLDE STVIVECPGG
1001: KETKSLTLEE ATDTILFCSS IVHDLVYEAA TIAMDKTKNV PVEQELLHPT VTVLGKSNAN RFSSYGRGGG TKEKKKQSSK ARRKLQRETE EKTEVDIEND
1101: ENASEAAAMM SNVGVPPPPS KGESLKPPPK LENKCNCSIM
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.